Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1015 ATGGCCCACTCCTGTCAATTGGATAATCGAAATACACATGTAAGTTGTAGATTGGTGGAAAGTTCCGAAGTGGCTAGCTTGGCGGGTCCCACCACAGTCTCTCCCATCCTTGTTACGGTCCTTACGGTGGACCTGCCAACACCTGAAACCCACCCCGGTATATCATATTTTAATGATTCACGCCCACCAGTATCCGCAACCATCTGTGACTCCTGGGATGATGGTGATGATGATGCTACCTTTCCCAGATCTAAAACTGCCATCACTTGGATTCCTTTCTCAAATCTTCTTCCTCAAATCTCCGTCGTCCCTAATTTTAACCAATGCCGCTCCAATTTTCTTTTCACTTTGATCTCAGCTGAGAGAGCTAGGGTTTCTCCGATGGAGTCCGAACTCAAAGACCTCGATCCCAGGTCCAACTCCCAGGATGTCTCCTCCAAAGACGATCGCCCTCTCCTCAAATCCGACTCCACCGTCGTGTCCCAGGACAACTTGCAGGAACTCGAGAAGAAATTTGCTGCGTACGTTCGCAGCGACGCCTACGGCCCCATGGGATGCGGCGAGCTCCCACTGAAGGAGAAGCTTCTCCTCGCGTTCGCCCTCGTAACGCTTGTGCCCATTCGTTTGGTGGTTGCCTTCACTATCTTGGTCGTTTACTACTTGATTTGTCGGGTGTGTACCCTATTTTCTGCTCCCAATCGTGAAGGCGAGGACGAGCAGGAGGATTATGCGCACATGGGTGGGTGGAGAAGGGCTGTGATTGTTCAGTGTGGCAGGTTTCTTTCTAGGGCTCTGCTTTTCACGCTGGGGTTTTATTGGATTAATGTAACCTACAGGGATCCGTTGACGACTGAGGACGAGGGCAAAGATGAAGATGAAGAACCTGAAAGACCCGGGGCAATAATATCTAACCATGTATCTTACTTGGATATTTTGTATCACATGTCTTCTTCCTTTCCGAGCTTTGTTGCTAAGAGATCAGTGGCTAAACTTCCTCTAATTGGTCTCATCAGCAAGTGCCTTGGTTGTGTCTATGTCCAGCGGGAGTCAAAATCATCTGACTTTAAGGGTGTTGCAGGTGTTGTAACTGAAAGAGTTTGTGAAGCTCATCAAAATAAATTTGCTCCAATGATGATGCTTTTTCCAGAAGGCACAACCACAAATGGGGGTTTCCTCCTTCCATTCAAGACAGGTGCATTTTTAGCAAAAGCCCCTGTGCTTCCTGTGATTCTAAGATATCCTTACCAGAGATTTAGTCCTGCCTGGGACTCCATATCTGGGGTGCGCCATGTGATATTTCTTTTCTGTCAATTTGTAAATCACATCGAAGTAACAAGGTTACCTGTATACATCCCCTCACAGCAGGAGAAGGATGATCCAAAATTGTATGCTAATAATGTCCGAAAGTTGATGGCTAGTGAGGGTAATCTAATAATGTCAGATATTGGACTTGCTGAGAAGCGAATATATCATGCTGCTCTCAATGGTTTGTTTTGCCAACGCTAA 1506 0.4681 MAHSCQLDNRNTHVSCRLVESSEVASLAGPTTVSPILVTVLTVDLPTPETHPGISYFNDSRPPVSATICDSWDDGDDDATFPRSKTAITWIPFSNLLPQISVVPNFNQCRSNFLFTLISAERARVSPMESELKDLDPRSNSQDVSSKDDRPLLKSDSTVVSQDNLQELEKKFAAYVRSDAYGPMGCGELPLKEKLLLAFALVTLVPIRLVVAFTILVVYYLICRVCTLFSAPNREGEDEQEDYAHMGGWRRAVIVQCGRFLSRALLFTLGFYWINVTYRDPLTTEDEGKDEDEEPERPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLIGLISKCLGCVYVQRESKSSDFKGVAGVVTERVCEAHQNKFAPMMMLFPEGTTTNGGFLLPFKTGAFLAKAPVLPVILRYPYQRFSPAWDSISGVRHVIFLFCQFVNHIEVTRLPVYIPSQQEKDDPKLYANNVRKLMASEGNLIMSDIGLAEKRIYHAALNGLFCQR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1015 501 MobiDBLite consensus disorder prediction 129 158 - -
Vvi18g1015 501 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 159 486 - -
Vvi18g1015 501 MobiDBLite consensus disorder prediction 129 154 - -
Vvi18g1015 501 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 296 478 - -
Vvi18g1015 501 CDD LPLAT_LPCAT1-like 263 488 IPR045252 GO:0008374
Vvi18g1015 501 SMART plsc_2 299 414 IPR002123 GO:0016746
Vvi18g1015 501 Pfam Acyltransferase 295 409 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1015 Vvi-Chr18 10278322 10286441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1015 128 500 Acyl Lipid Metabolism Gene Families AT1G80950 67.684 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1015 K13510 - vvi:100267860 743.421