Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1014 ATGGAAGTAAATATTCTCGCATTTATTGCTACTGCACTGTTCATTCTAGTTCCTACTGCTTTTTTACTTATCATTTACATAAAAACAGTTAGTCAAAATAATTAA 105 0.2762 MEVNILAFIATALFILVPTAFLLIIYIKTVSQNN* 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1014 34 PANTHER PHOTOSYSTEM II REACTION CENTER PROTEIN M 1 34 IPR007826 GO:0009523|GO:0015979|GO:0016020|GO:0019684
Vvi18g1014 34 NCBIfam photosystem II reaction center protein PsbM 1 33 IPR007826 GO:0009523|GO:0015979|GO:0016020|GO:0019684
Vvi18g1014 34 Hamap Photosystem II reaction center protein M [psbM]. 1 34 IPR007826 GO:0009523|GO:0015979|GO:0016020|GO:0019684
Vvi18g1014 34 Pfam Photosystem II reaction centre M protein (PsbM) 1 31 IPR007826 GO:0009523|GO:0015979|GO:0016020|GO:0019684
Vvi18g1014 34 SUPERFAMILY Photosystem II reaction center protein M, PsbM 1 34 IPR037269 GO:0019684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1014 K02714 - psom:26895682 66.2402