Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1011 ATGGTGGGTGCTGAATCCGGGAGGCCTCATGTTGCACTTCTTCCAAGCCCAGGCATGGGCCATATAATTCCCCTGTTGGAGATGGCCAAACGCTTGGTTCTCCACCATGGCTTCCATGTCAGCTTCATCACCATCACCACCGAAGCTTCAGCTGCCCAGACCCAGCTGCTCCGTTCCCCCAACCTTCCTTCCGGGCTTCACGTCGTCGAACTCCCTCCTGCTGACATGTCTACCATTCTCCATGACGACATGACGATCGTGCAACGGCTATGTCTCATTGTCCAGGAGAGCCTCCCTTATATCAGGTCCGTTCTCAGGGAGAACCCACCTCAAGCTCTCATAGTGGACATATTCTGCACCGATGCTTTCCAGATTGCCAAAGACCTTTCCATTCCCGCTTACTCCTTCTTTACTGCCCCTACGGCTTTGCTTGCCTTGTCTTTGTACCTTCCAACCATGGACCGTGAGATTGAGGGCGAGTACGTGGATCTTCCAAAGCCAGTTCAGGTCCCTGGCTGCAACGCTATTCGCACTGAAGACCTACTAGACCAGGTCCGCAACCGGAAGATTGAGGAGTACAAGTGGTACTTGTTAAGCGTCAGCCGGCTGCCCATGGCGGTTGGTATTTTCGTGAACACTTGGGAGGATCTTGAACCGGTGTGGCTACGAGGTCTGAGGGAGAACTCTTTCTTCCAGCAGATACCAATTCCACCGGTTCTTCCAATCGGACCGCTGATCAAAGAGGATGAACCACTGACTGACTTCGATAATGACTGCATTGAGTGGCTAGACAAGCAGCCACCAGACTCCGTTCTATTCATAACACTGGGTAGTGGTGGCACACTGACATCCACACAGCTCACTGAGTTGGCATGGGGCTTAGAACTCAGCCAACAACGATTCATCTTGGTGGTACGCACGCCAAGCGATGCAAGTGCGTCTGGTGCATTTTTCAACGTGGGGAATAATGTAATGAAAGCGGAGGCATATCTGCCCCAAGGGTTCATGGAAAGGACTCAAGAAGTTGGACTGGTGATCCCGTCTTGGGCTCCACAAGTGACGGTGCTCCGCCACCCCTCCACCGGCGGATTCCTCTCACACTGCGGGTGGAACTCGACCTTGGAAAGCATAAGCCACGGCGTTCCCATGATTGCGTGGCCGCTGTACGCGGAACAAAGGATGAATGCCACGATGTTGACGGAAGAGGTGGGGGTGGCAGTGCGTCCAGTGGTGGGAGAAGGGAAAAACGTAGTGGGACGGGAGGAGATAGAGAGGGTGGTGAGGTTGGTGATGGAAGGTGAAGAGGGGAAAGAGATGAGGCGTAGGGTGCGAGAGCTGCAAAGCAGTGCCCTGGCCACACTGAAACCAGGTGGGCCATCTTTTGAGGCCCTTTCTGAAGTGGCTGGGACCTGGACAACCACCGCTCATTAG 1431 0.5423 MVGAESGRPHVALLPSPGMGHIIPLLEMAKRLVLHHGFHVSFITITTEASAAQTQLLRSPNLPSGLHVVELPPADMSTILHDDMTIVQRLCLIVQESLPYIRSVLRENPPQALIVDIFCTDAFQIAKDLSIPAYSFFTAPTALLALSLYLPTMDREIEGEYVDLPKPVQVPGCNAIRTEDLLDQVRNRKIEEYKWYLLSVSRLPMAVGIFVNTWEDLEPVWLRGLRENSFFQQIPIPPVLPIGPLIKEDEPLTDFDNDCIEWLDKQPPDSVLFITLGSGGTLTSTQLTELAWGLELSQQRFILVVRTPSDASASGAFFNVGNNVMKAEAYLPQGFMERTQEVGLVIPSWAPQVTVLRHPSTGGFLSHCGWNSTLESISHGVPMIAWPLYAEQRMNATMLTEEVGVAVRPVVGEGKNVVGREEIERVVRLVMEGEEGKEMRRRVRELQSSALATLKPGGPSFEALSEVAGTWTTTAH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1011 476 CDD GT1_Gtf-like 9 448 IPR002213 GO:0008194
Vvi18g1011 476 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Vvi18g1011 476 Gene3D Glycogen Phosphorylase B; 10 460 - -
Vvi18g1011 476 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 7 473 - -
Vvi18g1011 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 345 411 IPR002213 GO:0008194
Vvi18g1011 476 Gene3D Glycogen Phosphorylase B; 257 455 - -
Vvi18g1011 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 468 - -
Vvi18g1011 476 FunFam Glycosyltransferase 10 245 - -
Vvi18g1011 476 FunFam Glycosyltransferase 257 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1011 Vvi-Chr18 10250572 10252002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1011 8 468 Glycosyltransferase AT3G50740 43.897 9.51e-139 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1011 K08237 - vvi:100255865 920.228