Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1002 ATGGCGCTTCGGAGAACGCTGGCGAAGCGCCTCCTTAACATAACCAGAACTCCATCGCCGGCCGGTACTCTAGAACACTCTCCCATCTCCTCTCCCTCATTCCAAAATCTAGTCCCTTCCAATGCAGTCAAAACGAATTTTCATGACGACTTTCTGGACTCCTCCGACAGCGGGTTTTTCCGGCGTTTCCTTCAGCGCCGAGCGTTGAATCAGCTTGCTAGGTTCCCGGAACTTCTCTCCGTGCCTGTCGGAGACAAGCTGAGAGAGAAGCTGAGAGGCTTGAACGGTACAGGTGAACGTCTCCGGCTTGACGGACTGAGTCCACCGGCGCCGGCGATGAGAGATTCTCTGGACGGAATATCTGTTGAAGATGCTAGAAAGCTGCTGAAGGTGTCGCAGGTGGAGAAGCTGAAGTGGACGCTGAGACAGATCCCGAAGAACTCTATTCCGTATTCGGAGTTCATCCAGATCTGCGTTGAAGTTTGTTCGAACAAGGATCAAGGTGCAGAGTTTGCCAAGATGTTGGATGAGTCCGGGAGTGTCATCGTTCTAGGGAACATCGTGTTTCTGCGGCCGGAGCAGGTGGCCAAGTCCATGGAGACCCTCATCTCTCAATCAATAGCCACCCCGAATGACCCAAGAAGAGAAGAACTAGAGCAGATGGAGAAGCAGAAGAGCGTAATCGACCAAAAAGCCAAGACTCTGGTCCAAGGAGAACTCTACTGTGGGCTGGGCTTCCTGGTTCTCCAGACACTGGGCTTCATGAGGCTCACCTTCTGGGAACTGAGTTGGGATGTGATGGAGCCCATCTGCTTCTTCGTGACCTCGCTCCACTTTGCCGGCGCCTATGCCTTTTTCCTCAGAACCTCCAAAGAACCGTCGTTCGAGGGGTACTTCCAGCGCCGATTCAAGGCCAAGCAAAAGCAGTTGATGAAGACCCACAACTTTGACTTGGAAAAGTACAACAACCTCTGCAGAGCCTTCTATCCTAACTACTACTCACCCAACTCAGACCATTTTCCCCCCTCTGATCTTGCAGAGGGAGCTTTTTTTGGTGCTCTGCACCGTTGA 1071 0.5247 MALRRTLAKRLLNITRTPSPAGTLEHSPISSPSFQNLVPSNAVKTNFHDDFLDSSDSGFFRRFLQRRALNQLARFPELLSVPVGDKLREKLRGLNGTGERLRLDGLSPPAPAMRDSLDGISVEDARKLLKVSQVEKLKWTLRQIPKNSIPYSEFIQICVEVCSNKDQGAEFAKMLDESGSVIVLGNIVFLRPEQVAKSMETLISQSIATPNDPRREELEQMEKQKSVIDQKAKTLVQGELYCGLGFLVLQTLGFMRLTFWELSWDVMEPICFFVTSLHFAGAYAFFLRTSKEPSFEGYFQRRFKAKQKQLMKTHNFDLEKYNNLCRAFYPNYYSPNSDHFPPSDLAEGAFFGALHR* 357
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1002 356 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 65 333 IPR039055 GO:0051560
Vvi18g1002 356 Pfam Mitochondrial calcium uniporter 165 324 IPR006769 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g1002 Vvi-Chr18 10193412 10194992 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1002 K20858 - vvi:100262482 696.427