Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0999 ATGGAATTCTGGAGGTCCCTCAGTTCTAACAATGGATTAAAACACCGCCCTTTGAGTCTTCTCAGGATCTTAAGGGGACTGATATGTTTAGTGTTTTTTCTTTCAACTGCATTTATGTTTTTAGTGTATTTGGGACCTCTGGCTGCTGGCCTGATGCGGCTGTTTAGCATACGCTACAGTAGGAGAACAACTTCTTTCATTTTTGGTCTTTGGCTAGCCTTGTGGCCCTTTCTATTTGAAAAGATAAACAAGACTAAATTCATTTTTTCTGGAGAAACTGTTCCTGAAGACCAGCGTGTTTTGCTTATTGCCAACCACAGAACAGAGGTTGATTGGATGTATTTCTGGAATCTTGCAATGCGGAAGGGTTGCTTGGGCTACATCAAATATATTCTAAAGAGCAGTTTGATGAAATTACCTGTCCTTGGTTGGGGATTTCACCTTTTGGAGTTCATATCCGTGGAGAGGAAGTGGGAAGTTGATGAGCCAATTTTGCGCCAAAAACTGTCGACTTTTATTAATCCTGCAGATCCCTTGTGGCTTGCTGTCTTCCCTGAAGGAACTGATTTTACTGAAGAGAAGTGCAAAAGGAGTCAGAAATTTGCAGCTGAAAATGGACTGCCTGTACTGAACAATGTGCTGCTTCCTAAAACGAGGGGTTTCTGTGCTTGCTTGGAAGTTCTAAGAGGATCCTTGGATGCAGTCTATGATGTGAGTTTTGCTTACAAACATCAATGCCCTAATTTCTTGGATGTGCTCTTTGGCGTGGATCCTTCAGAAGTTCACATGCATGTTCGACGTATACCTGTCAATGAGATCCCAGAGACTGAAAGTGAGGCTGCAGCTTGGTTGATTCATACATTCCAGATCAAGGATCAGTTGCTCTCCGATTTTAATTATCATGGGCATTTCCCCAATCAAGGAACAGAAGGAGAAGTTTCTATCATGAAGTACTTGGCAAATTTTTCAGTAGTGATTGCTCTGACAGGCATATTTACATTTCTTACCTTTTTCTCATCCATTTGGTTTAAGATACACGTGAGTTTAGTTTGTGCATATATTGCTTCTACTTTTTTTGATATTAGACCTTCGACTTTTCTAGGTTTGTTAAATAAAGCTTCAAGAAAACGAAATGAATAG 1140 0.4035 MEFWRSLSSNNGLKHRPLSLLRILRGLICLVFFLSTAFMFLVYLGPLAAGLMRLFSIRYSRRTTSFIFGLWLALWPFLFEKINKTKFIFSGETVPEDQRVLLIANHRTEVDWMYFWNLAMRKGCLGYIKYILKSSLMKLPVLGWGFHLLEFISVERKWEVDEPILRQKLSTFINPADPLWLAVFPEGTDFTEEKCKRSQKFAAENGLPVLNNVLLPKTRGFCACLEVLRGSLDAVYDVSFAYKHQCPNFLDVLFGVDPSEVHMHVRRIPVNEIPETESEAAAWLIHTFQIKDQLLSDFNYHGHFPNQGTEGEVSIMKYLANFSVVIALTGIFTFLTFFSSIWFKIHVSLVCAYIASTFFDIRPSTFLGLLNKASRKRNE* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0999 379 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 17 354 - -
Vvi18g0999 379 Pfam Acyltransferase 89 242 IPR002123 GO:0016746
Vvi18g0999 379 SMART plsc_2 100 222 IPR002123 GO:0016746
Vvi18g0999 379 CDD LPLAT_LCLAT1-like 76 266 - -
Vvi18g0999 379 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 28 192 - -
Vvi18g0999 379 Pfam Acyltransferase C-terminus 252 317 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0999 Vvi-Chr18 10156807 10159389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0999 1 364 Miscellaneous Gene Families AT1G75020 63.562 4.09e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0999 K13513 - pvy:116110619 552.362