Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0994 ATGCGTACACCACCGCTTCTCACCCTTTTCTTCTTCTTCCTTGTAATTTATCTCTTCTCCCTCTCTTTCACTGCAGCCAATGCCACCACTCTCCTCTCTCAACACTTCAGAGAAGCACCACAGTTCTACAATTCCCCAGATTGTCCTTCCCTCATTGAAGAGGATAATGAGGATGATGATGATGCTTCGGAAGAGGACAGCAACGGTGGCTACATATGTTCGGACCTCGCCGTCCATGTAGCAATGACCCTTGACACTGCATACATCCGAGGCTCGGTGGCCGCCATCCTCTCAGTTCTCCAGCACTCCTCTTGTCCCCAAAACGTCGTCTTCCACTTCGTGGCCTCCGCCTCCTCCAACGCGTCCCTCCTACGCGCCACCATCTCCACCACCTTCCCCTACCTCCGCTTCCAAGTCTACAGCTTCGATGACTCCGCCGTGGCGGGGCTCATCTCCACTTCAATTCGCTCCGCCCTCGACTGCCCCCTCAACTACGCCCGTAGCTACTTGGCAAATATCCTCCCCTTCTGCGTTCGACGAGTGGTGTACCTTGACTCTGACCTCGTCCTGGTCGACGACATCGGCAAGCTCGCTGCCACCCCGCTGGGAGATAGCTCAGTCCTGGCCGCACCGGAGTACTGCAACGCCAACTTCACTACCTACTTCACCCCCACGTTTTGGTCCAACCCTTCACTCTCATTGACATTTGCAAATCGCAAGGCCTGTTACTTTAACACCGGAGTGATGGTCATCGATCTTGACCGCTGGAGAGCCGGAGACTACACGAGCAAGATTGAGGATTGGATGGAGCTCCAAAAGAGAATGAGGATATACGAATTAGGTTCTCTTCCACCTTTTTTGCTGGTATTTGCGGGTAACATAGTAGCGGTTGATCACAGATGGAATCAACACGGTCTTGGCGGTGATAATTTCCGGGGCCTTTGCCGTGATCTACATCCGGGGCCGGTGAGTCTTCTACATTGGAGTGGTAAAGGTAAGCCATGGGCTCGACTTGACGCCAACCGTCCATGCCCCTTGGACGCTCTCTGGTCTCCTTATGATCTCTTACAGACTCCATTTTCTCTGGATTCTTGA 1095 0.5333 MRTPPLLTLFFFFLVIYLFSLSFTAANATTLLSQHFREAPQFYNSPDCPSLIEEDNEDDDDASEEDSNGGYICSDLAVHVAMTLDTAYIRGSVAAILSVLQHSSCPQNVVFHFVASASSNASLLRATISTTFPYLRFQVYSFDDSAVAGLISTSIRSALDCPLNYARSYLANILPFCVRRVVYLDSDLVLVDDIGKLAATPLGDSSVLAAPEYCNANFTTYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLDRWRAGDYTSKIEDWMELQKRMRIYELGSLPPFLLVFAGNIVAVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWSPYDLLQTPFSLDS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0994 364 Pfam Glycosyl transferase family 8 79 337 IPR002495 GO:0016757
Vvi18g0994 364 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 343 IPR029044 -
Vvi18g0994 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 78 355 IPR029044 -
Vvi18g0994 364 FunFam Hexosyltransferase 79 344 - -
Vvi18g0994 364 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 16 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0994 Vvi-Chr18 10119132 10120226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0994 27 364 Glycosyltransferase AT1G19300 78.402 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0994 K20893 - vvi:100852929 687.952