Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0985 ATGGCAATTTCCATGTCCTCCCTTACATCTTCACTCTCGTCTCTTTCATTTTCTTCCCATATTTCTCAAAGACCCTCTTCACTCTCCTTTGTCCGCTCCAATTCTCTTTCCATTTCCCATCTGACCAAAACCTCTTCACTGGCCGTCGTTGCCTCCGCTGCTGCGGTTGCTTCGCCGCTTGAATTGGAGACAGCAGACTTGAAGAAATACGTCAAATCAAGGCTTCCCGGTGGCTTCGCCGCGCAAACAATCATCGGTACTGGTCGCCGAAAATGCGCCATTGCTCGAGTCGTTCTTCAGGAAGGCACTGGCAAAGTTATTATCAATTACCGTGACGCCAAGGAGTATCTTCAAGGCAATCCATTATGGCTTCAGTACGTCAAAGTTCCGTTGGTAACTTTGGGGTATGAAAGTAGTTATGATGTGTTTGTTAAAGCTCATGGTGGTGGCCTCTCTGGTCAGGCTCAGGCCATCTCCCTTGGCATTGCCCGGGCATTGCTCAAGGTGAGTGAAGACCACAGGGGGCCACTTAGAAAGGAAGGACTCCTAACAAGGGACTCAAGAGTGGTTGAAAGGAAGAAAGTGGGTCTCAAGAAAGCTCGCAAAGCCCCACAGTTTTCGAAACGTTGA 630 0.4905 MAISMSSLTSSLSSLSFSSHISQRPSSLSFVRSNSLSISHLTKTSSLAVVASAAAVASPLELETADLKKYVKSRLPGGFAAQTIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRGPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0985 209 Hamap 30S ribosomal protein S9 [rpsI]. 79 209 IPR023035 -
Vvi18g0985 209 ProSitePatterns Ribosomal protein S9 signature. 148 166 IPR020574 GO:0003735|GO:0005840|GO:0006412
Vvi18g0985 209 Pfam Ribosomal protein S9/S16 88 209 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vvi18g0985 209 FunFam 30S ribosomal protein S9 79 209 - -
Vvi18g0985 209 PANTHER RIBOSOMAL PROTEIN S9 55 209 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vvi18g0985 209 SUPERFAMILY Ribosomal protein S5 domain 2-like 83 209 IPR020568 -
Vvi18g0985 209 Gene3D - 75 209 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0985 Vvi-Chr18 10033437 10037269 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0985 K02996 - vvi:100248841 363.614