Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0982 ATGTCATCCTCGATGTTCAACGGCAACAGCATTTCCATTTCAGTGTCCGATGACGACTCCGACGAAGTCGGTAAGATGAGGGTCCGAGTCCGAAGAAAGCGCAAGAAACCAGGCTTACGAATTAAGAACGACTTGATCGGGCGGATTGTCAGGAAGCTTTTGAAATGGTGGATGGTCTTGCTCTTCCTTCCTGCGGCTGGTTTGCTGCTTTTCGAGGCCTCCAGCATCGGGCGAAAACCCGCCTTGGTAATTGATTCCCAGCTCTCTACGGCCAAGAAGCCGAGTTTCCCTTTAGAGAGGGAACCCAATTCCAATTTGAATCGCCTCGATCCCACTACTCGGGTTATTGGTGGTGTCAGACAACGTTGTTTGAAGATCCTACCTCCTGAAGAACTTCAGCATCTAGATATTCCTGCAGTTGAAGAACCAACTAATCTTGTTAAAAAAGTGGTGTACATATCACAGAATGATTTAACTTATGTAGCGGGTAACAGTACCCTGCCTGAGCAGCACACAGAACCCTCAAGATTTAATATGTTTACAGGATACCAAACTCTTGATCAGCGAGAGGAAAGTTTTAAGGCAAACGAAACTGCTCTGGTGCATTGTGGTTTCTACAGTGAAAATGGAGGATTTAAGATTTCTGATGAGGATAGAACTTACATGCAAACTTGTAAAGTTGTGGTGTCTACTTGTGCATTTGGTGGTGGGGATGATCTTTACCAACCTATTGGAATGTCAGAGACATCATTGCAAAAGGTTTGCTATGTGGCATTCTGGGACGAAATCACTCGTATGACACAGGAATTACAGGGGAACAGAATTGGTGAGAACCATTTTATTGGGATATGGCGCATTGTGGTTGTAAGAGATCTACCTTTCACCGACCAGCGGTTGAATGGTAAAATCCCAAAGATGTTAGGTCATCGACTTTTTCCTCAGGCAAGGTATTCTATTTGGGTAGACTCAAAGTCCCAATTCCGCAGGGACCCTTTAGGTGTATTGGAAGCTCTTCTTTGGCGTCCAAATTCTGTACTTGCTATTTCAGAACATGGAGCACGTAGTAGTGTCTATGATGAGGCAAAGGCTGTTGTCAAGAAACACAAAGCCACACCAGAAGAAGTTGAAGTACAGTTGATGCAGTATCGTCATGATGGCTTGCCTGAGGACAAGAGATTTAATGGAAAGAAAGCTCTCTCTGAAGCTTCTGTAATAGTGAGGGAACATACACCATTGTCTAACCTATTCATGTGCCTCTGGTTCAATGAGGTGGTTCGTTTCACTTCCCGTGATCAGCTGAGCTTCCCATACACTCTCTGGCGGTTGAAAGTGCTCAAGAACATCAATATATTCCCTGTTTGCACTCGTAAAGATCTTGTTAATAGTATGGGCCACATCCGCAAGGCTAAACCTTTAATAACTTCCCATGGTGCTCTGGTATAG 1443 0.4449 MSSSMFNGNSISISVSDDDSDEVGKMRVRVRRKRKKPGLRIKNDLIGRIVRKLLKWWMVLLFLPAAGLLLFEASSIGRKPALVIDSQLSTAKKPSFPLEREPNSNLNRLDPTTRVIGGVRQRCLKILPPEELQHLDIPAVEEPTNLVKKVVYISQNDLTYVAGNSTLPEQHTEPSRFNMFTGYQTLDQREESFKANETALVHCGFYSENGGFKISDEDRTYMQTCKVVVSTCAFGGGDDLYQPIGMSETSLQKVCYVAFWDEITRMTQELQGNRIGENHFIGIWRIVVVRDLPFTDQRLNGKIPKMLGHRLFPQARYSIWVDSKSQFRRDPLGVLEALLWRPNSVLAISEHGARSSVYDEAKAVVKKHKATPEEVEVQLMQYRHDGLPEDKRFNGKKALSEASVIVREHTPLSNLFMCLWFNEVVRFTSRDQLSFPYTLWRLKVLKNINIFPVCTRKDLVNSMGHIRKAKPLITSHGALV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0982 480 PANTHER ALKALINE CERAMIDASE-RELATED 10 471 IPR006852 -
Vvi18g0982 480 Pfam Protein of unknown function (DUF616) 159 465 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0982 Vvi-Chr18 10017308 10021092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0982 - - vvi:100266014 949.888