Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0979 ATGGAGTGCGTTGTTCAGGGAATCATAGAGACCCAGCATGTTGAGGCCCTTGAGATCCTTCTCCAAGGTCTTTGTGGTGTTCATAGAGAACGATTAAGGATCCATGAATTGTGCCTCAAAAGTGGCCCAAACCTCGGGCTTGTAGCTTCAGAGGTTCGAGTATTATGTGATCTTGAGCAGCCAGAACCTACTTGGATAGTTCGGCATATTGGGGGTGCCATGAGAGGTTCTGGTGCTGAACAAATTTCAGTTCTGGTGAGGACTATGGTGGAAAGCAAAGTAAGCAAGAATGTATTGCGCTTATTTTATGCACTTGGCTACAGATTGGATCATGAATTGCTGAGAGTAGGATTCGCCTTCCATTTTCAAAGGGGTGCTTCAATTACAGTTACTGTGTCGTCAGTCAATAAGATGCTTAAATTACATGCAACTGATGAGGCTGTGCCAGTGACACCTGGTATACAGCTGGTTGAAGTGACAGCCCCTGCATCTTCCGAAAACTATAGTGAAGTTGCTGCTGCTGTGTCATCCTTCTGTGAATATCTTGCACCGCTTCTGCATTTATCAAAACCTGGTACCTCAACAGGAGTTGTCCCTACTGCTGCTGCAGCTGCAGCATCTCTCATGTCAGATGCTGGGGTTACAACATGA 651 0.4593 MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGLVASEVRVLCDLEQPEPTWIVRHIGGAMRGSGAEQISVLVRTMVESKVSKNVLRLFYALGYRLDHELLRVGFAFHFQRGASITVTVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPASSENYSEVAAAVSSFCEYLAPLLHLSKPGTSTGVVPTAAAAAASLMSDAGVTT* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0979 216 Gene3D - 1 190 - -
Vvi18g0979 216 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 1 201 IPR019095 GO:0003712|GO:0006357|GO:0016592
Vvi18g0979 216 FunFam Mediator of RNA polymerase II transcription subunit 18 1 190 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0979 K15135 - vvi:100250557 417.542