Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0938 ATGGAGGAGAGGCCAGAGACGGAGCTCATTTCCATTCCGGCTACTCCACGTGTCTCGACGCCGGAGATACTGACGCCCTCGGGGCAGAGGTCGCCGAGGCCGGCTTCCAAGGCGTGGACGCCCACGTCCTTTATATCGCCCCGGTTTCTGAGCCCAATAGGGACGCCGATGAAGAGGGTGCTGATAAACATGAAGGGCTACTTGGAGGAGGTGGGTCATCTCACCAAACTCAACCCACAAGATGCATGGCTTCCTATTACTGAGTCTCGCAATGGGAACGCTCATTACGCTGCGTTTCATAACCTCAATGCTGGGGTTGGCTTTCAGGCCCTCGTTTTGCCTGTTGCTTTCGCTTTTCTAGGCTGGAGTTGGGGAATACTTTCCTTAACCATAGCCTACTTTTGGCAACTTTATACATTGTGGATTCTAGTTCAACTACATGAAGCAGTTCCAGGGAAGAGGTACAATAGATATGTGGAACTTGCACAAGCAGCATTTGGAGAAAGACTGGGCGTTTGGCTTGCTCTCTTCCCAACTGTTTATTTGTCAGCAGGAACTGCAACAGCTCTGATTCTCATAGGAGGGGAAACCATGAAACTATTCTTCCAGATAGTTTGTGGCCCACTCTGTACATCAAACCCTCTAACAACAGTAGAGTGGTATCTGGTGTTCACATCTCTATGCATTGTTTTATCCCAGCTGCCAAACCTCAACTCAATTGCAGGACTCTCTCTCATAGGGGCAGTGACAGCCATCACTTATTCTACTATGGTGTGGGTACTCTCTGTAAGCCAACAAAGACCACCCCCAATCTCCTACCAACCCCTTTCATCCCCGTCTTTTTCTGCTTCCGTCTTCTCAGTCATGAACGCCCTTGGAATTGTGGCCTTTGCATTCAGAGGTCACAATTTAGCCATGGAGATCCAGGCAACAATGCCGTCAACCTTTAAGCACCCTGCTCATGTTCCTATGTGGAGGGGGGCTAAAGTTGCCTATGTGTTGATTGCCATGTGCATATTTCCTGTCGCCATTGGAGGTTTTTGGGCTTATGGAAACCTTATGCCATCGGGAGGAATTCTCAATGCCTTGTATGGATTTCACAGTCACGATATTCCAAGAGGACTTCTTGCAATGACCTTCCTTCTGGTTGTGTTCAACTGCTTGAGTAGTTTCCAAATATACTCAATGCCTGTTTTTGACAGTTTTGAAGCGGGCTACACCAGCCGAACCAATCGCCCTTGCTCAATCTGGGTCCGATCTGGTTTCCGGGTTTTCTATGGGTTCATCTCCTTCTTCATTGGTGTGGCACTGCCTTTCCTCTCTAGTCTTGCTGGTCTGTTAGGAGGACTTACTCTTCCAGTCACATTTGCATACCCTTGCTTCATGTGGGTTCTTATAAAAAAACCTACGAAGTTCAGCTTCAATTGGTACTTCAACTGGATCCTGGGGTGGTTGGGGATTGCTTTTAGCTTGGCCTTTTCCATTGGAGGTGTGTGGAGTATGGTGAACAGTGGACTTAAGCTGAAATTCTTTAAGCCCAGCTAA 1545 0.4816 MEERPETELISIPATPRVSTPEILTPSGQRSPRPASKAWTPTSFISPRFLSPIGTPMKRVLINMKGYLEEVGHLTKLNPQDAWLPITESRNGNAHYAAFHNLNAGVGFQALVLPVAFAFLGWSWGILSLTIAYFWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFGERLGVWLALFPTVYLSAGTATALILIGGETMKLFFQIVCGPLCTSNPLTTVEWYLVFTSLCIVLSQLPNLNSIAGLSLIGAVTAITYSTMVWVLSVSQQRPPPISYQPLSSPSFSASVFSVMNALGIVAFAFRGHNLAMEIQATMPSTFKHPAHVPMWRGAKVAYVLIAMCIFPVAIGGFWAYGNLMPSGGILNALYGFHSHDIPRGLLAMTFLLVVFNCLSSFQIYSMPVFDSFEAGYTSRTNRPCSIWVRSGFRVFYGFISFFIGVALPFLSSLAGLLGGLTLPVTFAYPCFMWVLIKKPTKFSFNWYFNWILGWLGIAFSLAFSIGGVWSMVNSGLKLKFFKPS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0938 514 Pfam Transmembrane amino acid transporter protein 91 502 IPR013057 -
Vvi18g0938 514 MobiDBLite consensus disorder prediction 1 39 - -
Vvi18g0938 514 MobiDBLite consensus disorder prediction 18 39 - -
Vvi18g0938 514 PANTHER OS05G0424000 PROTEIN-RELATED 95 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0938 Vvi-Chr18 9614160 9619672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0938 1 513 Organic Solute Cotransporters AT1G47670 90.716 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0938 - - vvi:100248950 1042.34