Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0936 ATGACTGGAGGAACTAGAGCTGCAATCTTTGTATATGCTATGGAGGGACTTGAGAACATGGCATACGTCGCCAACGCAGTGAGCCTTGTGACTTACTTTTATGGGTACATGAACTTCAGTCTAACAAAATCCGCCACCACACTTACCAACTTCATGGGAACCTCACTTCTACTTACACTTCTCGGAGGATTTATTTGTGACACCTACTTGTCCAGATTCAAGACATGTGTCCTGTTTGGATGCATAGAATTGGTGGGATACGCCCTCTTAACAGTACAAGCACACTTCAGCCAATTAAGACCATTTCCATGTAAGAATGTTGCACGGGACAAAATGGATCAATGTGAGGCTGCGGACAGTGGCCAAGTTGCAATCCTTTTTACTGGCCTCTATCTAGTGGCATTGGGCACTAGCGGAGTTAAAGCAGCTTTGCCAGCATTAGGAGCTGATCAATTTGATGAGAAGGATCCTAAGGAGGCACCCCTTATCTCCACCTTCTTCAACTGGTTCTTGTTTAGCCTCACGGTTGGGGCAATATTTGGTGTAACTTTTGTAGTGTGGATCAGCTCAAACCAGGGGTGGGATCTGGCGTTTGGAGTTTCCACACTCGTTGTTCTATTTTCTATTATTTTCCTATGCATGGGCAAATCCGTTTACCGGCATAATGCACCAAAGGGAAGCCCCATCCTCCGTATCGTACAGGTATTTGTGGCTGCCATCCGAAACAGGGCCCTTCCAGTACCAGAGAAGTCCGAAGAGTTACATGAGATTCATGACAAAGAAGTGGGCATGGAAAATGAGATTCTTGCAAGAACTGATCAATTCAGATTCCTGGACCGGGCAGCAATTGTTAGCACGGCATCCGGCACCTCGCCTTCAATTACTCCAAGACCCTGGAGGATGTGTACCGTGACTCAAGTTGAAGAAACAAAAATCCTGATACGCATGCTCCCCATTATACTGAGCACTTTCTTCATGAACACATGTTTGGCTCAGCTCCAAACCTTCTCCATCCAACAGAGCACCACCATGGACAGAAATCTCCTGGGTTTTCAGGTGCCCGGACCCTCAATCCCACTAATTCCCCTGCTATTCATGTTCATTCTTATCCCAATATATGAACGCATTTTTGTACCGCTGGCTCGGAAGGTCACCGGAATTCCCACTGGAATCCGACACCTCCAGCGAATTGCGATTGGGCTGGTTTTGTCAACTATTTCCATGGCAGTAGCAGGAGTAGTGGAAACCCGCCGCAAGTCTGCTGCCATTCAACACAACATGGTGGACTCACCTGATCCTCTGCCCATAAGTGTCTTTTGGCTAGGCTTCCAATATGCTATTTTTGGGGCGGCTGATATGTTTACATTGGTGGGGCTGCTAGAGTTTTTTTATGCAGAGAGTTCATTGGGTATGAAATCACTGAGCACAGCCATCGCATGGTGTTCGGTGGCATTTGGATACTTCACCAGCACAATTGTGGTAGAGGTGGTGAACAGGGTGAGCGGTGGATGGTTGGCAAGTAATAATTTGAACAGGGACAAGTTGAACTACTTCTATTGGTTATTAGCAGGACTAAGTGTGGTGAACTTTGGGGTGTATTTGGTATGTGCATCTTGGTACAGATACAAGAAGGTGGAAGTAAAACAACTAGGAAGCTCTGCTGGTGATGATGAAGGAAAGGCTTGA 1686 0.465 MTGGTRAAIFVYAMEGLENMAYVANAVSLVTYFYGYMNFSLTKSATTLTNFMGTSLLLTLLGGFICDTYLSRFKTCVLFGCIELVGYALLTVQAHFSQLRPFPCKNVARDKMDQCEAADSGQVAILFTGLYLVALGTSGVKAALPALGADQFDEKDPKEAPLISTFFNWFLFSLTVGAIFGVTFVVWISSNQGWDLAFGVSTLVVLFSIIFLCMGKSVYRHNAPKGSPILRIVQVFVAAIRNRALPVPEKSEELHEIHDKEVGMENEILARTDQFRFLDRAAIVSTASGTSPSITPRPWRMCTVTQVEETKILIRMLPIILSTFFMNTCLAQLQTFSIQQSTTMDRNLLGFQVPGPSIPLIPLLFMFILIPIYERIFVPLARKVTGIPTGIRHLQRIAIGLVLSTISMAVAGVVETRRKSAAIQHNMVDSPDPLPISVFWLGFQYAIFGAADMFTLVGLLEFFYAESSLGMKSLSTAIAWCSVAFGYFTSTIVVEVVNRVSGGWLASNNLNRDKLNYFYWLLAGLSVVNFGVYLVCASWYRYKKVEVKQLGSSAGDDEGKA* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0936 561 SUPERFAMILY MFS general substrate transporter 8 544 IPR036259 -
Vvi18g0936 561 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 3 542 - -
Vvi18g0936 561 Pfam POT family 73 501 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi18g0936 561 Gene3D MFS general substrate transporter like domains 1 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0936 Vvi-Chr18 9597925 9600920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0936 13 542 Organic Solute Cotransporters AT1G27040 44.030 7.09e-149 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0936 K14638 - vvi:100267755 1079.32