Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0935 ATGGATTTGAAGAGGAAAAGAAGAGCAATGTGCTTCACGTTCTCCGCTCTGGAGTGGGCCATTATTGGAACAAAGCCCAAAGAACTTTCCCAAAATGGTCCACCACACAAAATCCTAAAGGCAAAGGGAAAAGCCCGAGGGGGCCCAAATCCTGATTACCTGCCAGGCAAGTTCAAAACAAAGGTCGGTTTTGGTTCTTTTGCCTTTTTCCAACATAAAACTACGTCGTTTAGGTTTGCTTACAACGTATCTTTCGGTTTCCTCGCGCTCTGTTGTGACGGAAGAATGGACCTCCGGCAGTGCATCGGCAACCAAAACGACGTTGCTTTAGGCATCGCAAAGCACGTAGCCTTGACCGAAAGCAAGGACTCGAACCTAGTTTTATCGCCGCTGTCGATTCATGTGGTTCTGAGCTTGGTAGCAGCTGGCTCCAAGGGCGCAACGCTAGACCAGTTGCTCTCCTTTCTCAAATCCAAAGCCTCCGGCGATCTCAACGCCTTCGCTTCTGAGCTGGTTTCCCTAGTCTTTGCCGATGGTAGTCCTAGCGGTGGCCCTTGTTTGTCCTTCGCCAACGGTGTCTGGATCGATAAAACACTTCCTCTTAAACCCTCTTTCAAACAGATCGTCGACACCGCTTATAAGGCTGCTGTTCATCAAGCTGATTTCCGGATCAAGGCTGCTGAGGTAACCAGTGAAGCGAATTCATGGGCTGAAAAGGAGACCAATGGCCTTATCAAAGAAGTTCTTCCTCCTGGCTCAGTTGACTCTTCAACCAGGCTCATCTTTGCAAATGCTCTCTATTTTAAAGGGGCTTGGAATGAGAAGTTTGATGCATCAGCAACAAAAGATTATGACTTCCATCTTCTCAATGGGAGCTCGGTTCAAGTGCCCTTCATGACCAGCAAGAAGAAGCAACTTATTAGCACCTTTGATGATTTCAAAGTCTTAGGGCTTTCTTATAAACAAGGTGGTGATAAGCGTAGTTTCTCCATGTATTTCTTTCTTCCAGATGCAAAGGATGGCCTGCAGGCTTTGATAGATAAAGTTGGTTCTGATTCTGCATTCTTAGATCGCCATCTTCCATCTATGCCAGTTCCAGTGGGTGACTTTAGGATCCCAAGGTTCAAGATTTCTTTTGGGTTTGAAGCTTCCAAAGTCTTAAAGGGACTAGGTCTGGTGCTGCCTTTTACTGAAGGTGGCTTGACTGAGATGGTGGACTCCCCCATGGGGCAGGACCTATATGTCTCAAGCATTTTCCATAAATCCTTCATTGAAGTTAATGAGGAAGGCACAGAAGCTGCAGCTGCTTCTGTAGGTGTTGTGAAACTGAGGGGCATGCTTAGTACTGATAATATAGATTTCATAGCTGATCACCCGTTCCTGTTTGTGATCCGAGAAGACATGACTGGAGTTGTGCTGTTCATTGGGCATGTACTCAATCCTCTCGCAGGTTGA 1455 0.466 MDLKRKRRAMCFTFSALEWAIIGTKPKELSQNGPPHKILKAKGKARGGPNPDYLPGKFKTKVGFGSFAFFQHKTTSFRFAYNVSFGFLALCCDGRMDLRQCIGNQNDVALGIAKHVALTESKDSNLVLSPLSIHVVLSLVAAGSKGATLDQLLSFLKSKASGDLNAFASELVSLVFADGSPSGGPCLSFANGVWIDKTLPLKPSFKQIVDTAYKAAVHQADFRIKAAEVTSEANSWAEKETNGLIKEVLPPGSVDSSTRLIFANALYFKGAWNEKFDASATKDYDFHLLNGSSVQVPFMTSKKKQLISTFDDFKVLGLSYKQGGDKRSFSMYFFLPDAKDGLQALIDKVGSDSAFLDRHLPSMPVPVGDFRIPRFKISFGFEASKVLKGLGLVLPFTEGGLTEMVDSPMGQDLYVSSIFHKSFIEVNEEGTEAAAASVGVVKLRGMLSTDNIDFIADHPFLFVIREDMTGVVLFIGHVLNPLAG* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0935 484 Gene3D - 272 476 IPR042185 -
Vvi18g0935 484 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 105 481 IPR000215 GO:0004867|GO:0005615
Vvi18g0935 484 Pfam Serpin (serine protease inhibitor) 105 481 IPR023796 -
Vvi18g0935 484 ProSitePatterns Serpins signature. 454 464 IPR023795 -
Vvi18g0935 484 FunFam Predicted protein 123 312 - -
Vvi18g0935 484 CDD serpinP_plants 104 481 - -
Vvi18g0935 484 SMART serpin2 110 481 IPR023796 -
Vvi18g0935 484 SUPERFAMILY Serpins 93 481 IPR036186 -
Vvi18g0935 484 Gene3D Antithrombin, subunit I, domain 2 123 428 IPR042178 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0935 K13963 - vvi:100266122 764.992