Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0934 ATGGTAGAAACAGCAAGTCATCAGGCTCCGCCTCCCCAGGTGGCTAGGCCACCCCCTCCGCCACTTGGAGGATCCAGGGGTCCTATTTTTCCTCCTAATGAACAGCTGCATCAGCTTCACTTCTGCATCCACTCCAACCCTGCTTGGCCACAAGCAATTATATTGGCTTTTCAACACTATATTGTGATGCTTGGAAGTACAGTTTTGATTGCTAGTACCCTTGTGCCACTCATGGGTGGGAACAACGGTGACAAAGGTCGCGTGATCCAGACGTTGCTTTTTATGGCAGGAGTGAATACACTGCTTCAAACATTACTCGGGGCGAGGCTTCCTACTGTGATGGGTGCATCATTCGCATTCTTCATACCAGTCATGTCCATTGTTAATGATTTCGCTGATAAGACCTTCAAATCTGAGCATGAGAGGTTTGTCTACACTATGAGAGCTATTCAAGGGTCATTAATGGTTTCTTCCATCATCAACATCTTCCTTGGATATAGTAGGGTGTGGGGGAACTTGACTAGATTCTTCAGTCCAGTTATTCTTGTACCAGTTGTTTGTGTAGTGGGTCTTGGTCTGTTCATGAGGGGCTTCCCTCAGCTTGCTAATTGTGTGGAGATTGGTTTGCCAATGCTAATTCTACTGGTTATTGGCCAGCAGTATTTGAAGCGGATTCACCCAAGGGTCCAGCTCATCCTTGAGAGGTTTGGTTTGCTTTTATGCGTTGCTATTATCTGGGCTTTTGCTGGCATCCTGACTGTGGCTGGTGCTTACAAAAATGCCATGGAGCAGACAAAACGGAGTTGCCGCGTGGATCATTCTTACCTTATATCATCTTCTCCATGGATCAGAATTCCATATCCATTTCAGTGGGGTCCTCCTGTATTTAGAGCAAGCCATGTCTTTGGGATGATGGGAGCTGCACTTGTTACATCAGCTGAGTCAACTGGAACATTTTTTGCTGCTGCACGGCTTGCGGGTGCTACACCCCCTCCACCACATGTGCTCAGTCGAAGCATTGGTCTGCAGGGAATTAGCTTGCTGCTTGATGGGTTATTTGGGGCTGTTGTTGGTACCACTGCATCTGTTGAAAATGTGGGCCTCCTTGGACTCACACACATAGGGAGCAGAAGGGTGGTGCAGATATCAACTGCTTTCATGTTCTTCTTCTCCATATTTGGGAAGTTTGGTGCCTTCTTTGCATCTATTCCTTTACCAATATTTGCTGCCATATACTGTGTTCTATTTGGCATTGTTGCTGCTACTGGGATCTCATTTCTTCAATTTGCTAACAGTAATTCCATGAGAAACCTCTACGTCTTGGGGTTGTCCCTGTTCCTTGGGGTATCAATATCTCAATATTTTGTCTCACACACAACCACAGATGGTCATGGACCAGTTAAAACAGATGGAGGATGGTTCAATGACATCCTAAATACAATCTTCTCATCACCTCCAACTGTTGCCATTATCGTTGGGACGCTACTTGATAACACACTTGATCCAAGACGCTTCCATGATGACAGAGGAATTCAATGGTTGGTTCCATTCCATCACTGGAAGGGCGATTCAAGGAATGAGGAGTTTTACAACCTCCCTCTCAGGATAAATGAGTACATGCCCACCAGATATCTTTGA 1638 0.4579 MVETASHQAPPPQVARPPPPPLGGSRGPIFPPNEQLHQLHFCIHSNPAWPQAIILAFQHYIVMLGSTVLIASTLVPLMGGNNGDKGRVIQTLLFMAGVNTLLQTLLGARLPTVMGASFAFFIPVMSIVNDFADKTFKSEHERFVYTMRAIQGSLMVSSIINIFLGYSRVWGNLTRFFSPVILVPVVCVVGLGLFMRGFPQLANCVEIGLPMLILLVIGQQYLKRIHPRVQLILERFGLLLCVAIIWAFAGILTVAGAYKNAMEQTKRSCRVDHSYLISSSPWIRIPYPFQWGPPVFRASHVFGMMGAALVTSAESTGTFFAAARLAGATPPPPHVLSRSIGLQGISLLLDGLFGAVVGTTASVENVGLLGLTHIGSRRVVQISTAFMFFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAATGISFLQFANSNSMRNLYVLGLSLFLGVSISQYFVSHTTTDGHGPVKTDGGWFNDILNTIFSSPPTVAIIVGTLLDNTLDPRRFHDDRGIQWLVPFHHWKGDSRNEEFYNLPLRINEYMPTRYL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0934 545 MobiDBLite consensus disorder prediction 1 29 - -
Vvi18g0934 545 Pfam Permease family 51 455 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vvi18g0934 545 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 31 541 - -
Vvi18g0934 545 MobiDBLite consensus disorder prediction 11 27 - -
Vvi18g0934 545 NCBIfam purine/pyrimidine permease 53 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0934 Vvi-Chr18 9572162 9578026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0934 31 541 Organic Solute Cotransporters AT2G34190 58.708 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0934 - - vvi:100262591 1050.81