Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0931 ATGGAGGCCTTTCGTCTCCATGCTTTGTTCAAGAATATACCTCCATTTTCTCTGCAAAAGCTCCTCCATTTCTCTTCATCTTCTGCTGCAAACCCTAGCGCACGGCGTTTCGTCTCGGACGACTTAAGCGCTGACGGCAGTTCCATTTACCGGCACACCCTCAAGTTCCAGCGTCCCACCACCATTAAATGGTGCGACCGGTTCCACAACTCCGTCAGTTTTATTGGTTCAGTGGACCGTCCCCTGGAAAGACGCTATACGATAAACGGCGATCTGTATGTTTACACCGTGCTCCATGTCAAACCTTTCCGGGAAGCAAGACGCGATGTTAGGATATTCCTGCAGATGTGGGATAGGATGGCAGAAATATCTTTCAAGCATCTCAAACAAAATGATTTGATTCATGTCTCAGGTCATTTAGGATTTTACACAAAGGCCGATGACAACGGACAACTCAGACCATATCACAAGGTGATCGTAAAGGAATTAAATTATGTTACACAATTTGGACAGCCACCAACATACAAGAAAATTGAGAATTTAGAATCAGAAGGTGGAACAGGTTTGATAAAACCGAAAAGCCGCCTTTACTTGTGGCAAGTGTTCTTCTACAACCCTGATGAATGGTGGGATAACAGAAAACGTAAGAAAAAACCTAGTCAACCAGATTTCGAACACAAGCATACAGGTGAGGCTCTTTGGCTCCATAAAGGAGATCCTGTATGGGTCAGAAAACAACTGCAACTGCACGATTCGAGAATGGCAGAACTGGACCAAGTGCGACCTACTGGTATTCGCGCCGTGTCTCCCATGCAATTGTAA 822 0.4526 MEAFRLHALFKNIPPFSLQKLLHFSSSSAANPSARRFVSDDLSADGSSIYRHTLKFQRPTTIKWCDRFHNSVSFIGSVDRPLERRYTINGDLYVYTVLHVKPFREARRDVRIFLQMWDRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRPYHKVIVKELNYVTQFGQPPTYKKIENLESEGGTGLIKPKSRLYLWQVFFYNPDEWWDNRKRKKKPSQPDFEHKHTGEALWLHKGDPVWVRKQLQLHDSRMAELDQVRPTGIRAVSPMQL* 274
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0931 273 Gene3D - 65 167 IPR012340 -
Vvi18g0931 273 FunFam Protein OSB1 mitochondrial 62 167 - -
Vvi18g0931 273 Pfam Single-strand binding protein family 70 164 IPR000424 GO:0003697
Vvi18g0931 273 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN 29 254 IPR011344 GO:0003697|GO:0006260
Vvi18g0931 273 SUPERFAMILY Nucleic acid-binding proteins 69 255 IPR012340 -
Vvi18g0931 273 ProSiteProfiles Single-strand binding (SSB) domain profile. 69 167 IPR000424 GO:0003697
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g0931 Vvi-Chr18 9539944 9541391 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0931 - - vri:117906714 560.451