LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi18g0930	ATGCTACTTTTTGTTTTTGTTGGAAGTTTATTGCCTTATATTGAGGGTCTTGATTCATGGCTTTATGAAGGAACACTTGATGATCCTTGTAACGAGATGTTCTTTTATGCTAACAAAACAATTTCAATTGATGAAGCTGAGTTCTGGGAGAAGAGCTATCTTCTGAGACCATTGCAGAGCTTAGATGTTGAGCTCTCTGCTATGATTGGCACCAGCAGTCGCTTGCCTTCAACAAATGACAAGAAGGAAATGGCTGGGAGGGAATCCATCTCTACATCTAGCTCTATGAAAGGAAAAGAGCAAAGCAGTAAAGATCTTAAATTGTGTCCTCTTTTTGTTGAGGATATAGCCAAGCCAATTATTTCTGCTGGGAAATCATTGCAGCTGATCCGGCATGTTCCGATGATGACCTCAGCACCATCTGGCAGAAAGAGTGTTCATGAGATTAATGGTTTTGGAAGTTCCTATGATGGTAACATTTCAAGTAAGATTCATCGGGGGCAGAGCATAGCTGGGTTAACATTGTCAGAGATTTTCTGTGTGTCACTAGTGGGTCTTATAGGCCATGGTGATCACATCTCTAAGTACTTTTGGCTAGAGGATCCATGCAACCCCAAGATTTTCTCCTTGTTTGAATCTCACATGGACAAACAAAACTTGGAAAAAGGGAATGGTGAGAGCTTGCCAAATTTAGCTTGCTCAGAGAAGATTTGGTTTAAATTCTTGGTTGAGACGTTGTTGCAGAAAGGAGAGATTGATTTTGGATCTAAGCATAAGAATGCAAATGATTTTCATGATGTGAAGGAAGAGACTATAGCTGGAGGTGCTCTGGATGAATTGCTCCTGAGATCATCCTGTCCAGAAAATCCTGTTATCACTATGTGCAAATTGTTCCTCAATAAGAATAGGGATGCTTGGAGCACATTAAACTTGTCTAGGAATTTCTATCTCCCTCCTTTAAATGACGAGGGTTTACGAGAGGCTATTTTTGGTGAGAAGATTGGACTGGGTTCCTCAGCTAAAGGAACAGATTATGCTTTTGCTTTTAAGTTTGCTGAATCTGAATATCTTCGTTCAAAGGATGATACAAAACTGTTAGAAGAATTATTTCCCTTTCCAACTCTTCTTCCATCATTTCAGGAGAATCTCCAGATGTCAGAGCTCTTACCTTTCCAGAAAAATAGCACCCTTTCATCACGAGTTCTTACCTGGCTTCAAAGTGTAGAACTGAAGGTAGTTCCACTTCCTGTGGTTATTATGCAGGAATGTCTTATCGTCTACATCAAAAAGCAGGTGGATTATATTGGAAGACACATACTGTCGAAATTAATGAATGACTGGAGATTAATGGATGAGCTCGGGGTATTGCGTGCTATATACTTGTTAGGTTCAGGTGACTTGCTGCAGCACTTCTTAACTGTGCTTTTCAATAAACTGGATAAGGGAGAATCCTGGGATGATGATTTTGAGTTGAACACAATATTACAGGAATCCATTAGAAACTCTGCTGATGGCATGCTCTTAACGGCGCCAGATTCATTGGTTGTGTCTATAACTAAACATCATAGCCTCAATGGTGATGAGCAACATAATACAGCTTCTCTTGTCTCTACCCCTCGTAGAAGTCGTGAGAGCTTTGGGATTGATGGCCTTGATTTACTGAAATTCACATACAAGGTCTCTTGGCCACTTGAACTTATTGCCAACACAGAGGCAATTAAAAAGTATAACCAGGTGATGGGTTTCTTGTTGAAAGTCAAGCGTGCAAAATTTGTACTTGATAAAGCTCGGAGGTGGATGTGGAAGGGTAGAGGCACTGCAACAATCAACCGTAAGCACCACTGGCTAGTGGAGCAAAAACTCCTGCATTTTGTGGATGCTTTTCACCAATATGTGATGGACAGAGTATATCACAGTGCATGGCGTGAACTCTGTGAAGGTATGGCAGCAGCTGGATCTCTAGATGAAGTCATAGAAGTACATGAGGCCTACCTGTTGTCAATTCAACGGCAATGCTTTGTGGTTCCAGATAAGCTGTGGGCACTGATTGCCAGCAGAATCAATAGCATCCTTGGATTAGCTCTAGACTTCTATTCCATACAGCAAACCCTAAGTAGTGGTGGAGCAGTTTCTGCCATCAAGGCCAGATGTGAAATGGAAGTGGACAGGATTGAGAAACAGTTTGATGATTGCGTTGCCTTCCTTCTTAGAGTCCTGTCTTTCAAGCTCAATGTAGGCCACTTTCCCCATTTGGCAGATCTAGTTACTAGAATCAACTATAATTATTTCTACATGTCTGATAGTGGAAACTTGGTTACCGGTCCTGGCTCTGAAACTGTGACATCTAAGCTGGGGAAGGCCTTCCCAGTCTGA	2373	0.4151	MLLFVFVGSLLPYIEGLDSWLYEGTLDDPCNEMFFYANKTISIDEAEFWEKSYLLRPLQSLDVELSAMIGTSSRLPSTNDKKEMAGRESISTSSSMKGKEQSSKDLKLCPLFVEDIAKPIISAGKSLQLIRHVPMMTSAPSGRKSVHEINGFGSSYDGNISSKIHRGQSIAGLTLSEIFCVSLVGLIGHGDHISKYFWLEDPCNPKIFSLFESHMDKQNLEKGNGESLPNLACSEKIWFKFLVETLLQKGEIDFGSKHKNANDFHDVKEETIAGGALDELLLRSSCPENPVITMCKLFLNKNRDAWSTLNLSRNFYLPPLNDEGLREAIFGEKIGLGSSAKGTDYAFAFKFAESEYLRSKDDTKLLEELFPFPTLLPSFQENLQMSELLPFQKNSTLSSRVLTWLQSVELKVVPLPVVIMQECLIVYIKKQVDYIGRHILSKLMNDWRLMDELGVLRAIYLLGSGDLLQHFLTVLFNKLDKGESWDDDFELNTILQESIRNSADGMLLTAPDSLVVSITKHHSLNGDEQHNTASLVSTPRRSRESFGIDGLDLLKFTYKVSWPLELIANTEAIKKYNQVMGFLLKVKRAKFVLDKARRWMWKGRGTATINRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMAAAGSLDEVIEVHEAYLLSIQRQCFVVPDKLWALIASRINSILGLALDFYSIQQTLSSGGAVSAIKARCEMEVDRIEKQFDDCVAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSDSGNLVTGPGSETVTSKLGKAFPV*	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi18g0930	790	PANTHER	GAMMA TUBULIN COMPLEX PROTEIN	2	764	IPR007259	GO:0000226\|GO:0000922\|GO:0005815\|GO:0007020\|GO:0043015
	Vvi18g0930	790	Gene3D	-	449	763	IPR042241	-
	Vvi18g0930	790	Pfam	Gamma tubulin complex component N-terminal	5	141	IPR041470	-
	Vvi18g0930	790	MobiDBLite	consensus disorder prediction	73	101	-	-
	Vvi18g0930	790	Pfam	Gamma tubulin complex component C-terminal	449	764	IPR040457	GO:0043015
	Vvi18g0930	790	FunFam	Gamma-tubulin complex component	449	763	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi18g0930	1	496	Glycosyltransferase	AT1G20570	51.210	5.33e-157	472

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi18g0930	K16572		-	vvi:100247210	1573.53