Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0926 ATGAAGATGGGTATCAGCTTTGTAGCACCTGGACTCATCCTTCTTCTTACTGCGTGTTCGTTGGCAATCAGTGAGACTGACACCATTGTGGTTGGAGGGTCCGAGAACTGGCGCTACGGCTTCAACTACACCGGTTGGTCTCTCCAGCATGGCCCATTCTACATAAATGATAAGCTAGTGTTCAAGTATAATCCACCAAGCAAGAACAACTCACGGCATAGCGTATACTTGCTACCAAACCTTTGGAGCTTTGCAACTTGCGACTTCAGTCAAGCGAAGCTGTTGGCTAATCCGCAGCAAGGTGGTGGGAAGGGGTTTGTGTTTGAGCTCACAAACTGGAGGCCTCACTATTTTGCTTCAGGAGAGGAAGATGGTTCCCAATGCGAAGATGGGCAGATGAAATTCTTTGCTGTGCCTCTGCCTCGCTGGGGAAAATGA 438 0.4886 MKMGISFVAPGLILLLTACSLAISETDTIVVGGSENWRYGFNYTGWSLQHGPFYINDKLVFKYNPPSKNNSRHSVYLLPNLWSFATCDFSQAKLLANPQQGGGKGFVFELTNWRPHYFASGEEDGSQCEDGQMKFFAVPLPRWGK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0926 145 ProSiteProfiles Phytocyanin domain profile. 27 141 IPR003245 GO:0009055
Vvi18g0926 145 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi18g0926 145 Gene3D - 25 139 IPR008972 -
Vvi18g0926 145 PANTHER GLYCINE-RICH PROTEIN-LIKE 25 143 - -
Vvi18g0926 145 SUPERFAMILY Cupredoxins 28 138 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0926 Vvi-Chr18 9497807 9498340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0926 30 131 Miscellaneous Gene Families AT3G27200 29.412 2.23e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0926 - - vvi:104882539 312.768