Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0925 ATGAAGATGGGTACCAGCTTTGCCGCACCTGGATTCATCCTTCTTCTAACTGCATGCATGGTGGCAGTTAGTGAGGCTGACACAATAGTGGTTGGAGGGTCTGAACACTGGCACTACGGCTTCAACTATACCTATTGGTCTATCCAACATGGCCCTTTCTTCATAAATGATAAGCTAGTGTTCAAGTATAATCCACCAAGCAAGAACAACCCACGGCATAGCGTATACTTGCTACCAAACCTTTGGAGCTTTGTAACTTGCGACTTCAGTCAAGCGAAGCTGTTGGCTAATCCGCAGCAAGGTGGTGGGAAGGGGTTTGTGTTTGAGCTCACAAACTGGAGGCCTCACTATTTTGCCTCCGGAGAGGAACATGGTTCTCAGTGCGTGAATGGTCACATGAAGTTCTTTGCTGTGCCTTTGCCTCACTTGGGAAAATGA 438 0.4749 MKMGTSFAAPGFILLLTACMVAVSEADTIVVGGSEHWHYGFNYTYWSIQHGPFFINDKLVFKYNPPSKNNPRHSVYLLPNLWSFVTCDFSQAKLLANPQQGGGKGFVFELTNWRPHYFASGEEHGSQCVNGHMKFFAVPLPHLGK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0925 145 SUPERFAMILY Cupredoxins 26 139 IPR008972 -
Vvi18g0925 145 ProSiteProfiles Phytocyanin domain profile. 27 141 IPR003245 GO:0009055
Vvi18g0925 145 PANTHER GLYCINE-RICH PROTEIN-LIKE 24 142 - -
Vvi18g0925 145 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi18g0925 145 Gene3D - 24 139 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0925 Vvi-Chr18 9486690 9490134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0925 - - vvi:104882538 310.842