Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0923 ATGCCATCAGTGCACTCTGGTCCATGCTACCAAATGGAAAATCCGGCGCTGCTTTCCCTGCTCCGGCCGACTTCTAATGAGAAGCGCTCCAAATCCTCCGGCGGATTCTTTCGAATGTTCAAGCTCTTCCCTCTCCTGACCTCAGGATGCAAGATGGTGGCGCTTCTGGGTCGACCCAGAAGACCCCAGATAGGGGACAGTGCCACCACAGGGACAATTTTTGGGTACCGTAAGGGGCGAGTGAGCCTAGCAATCCAAGATGATCCTCATTGCGTGCCCATGTTCATCATAGAGCTCCCAATGCTTACCAGCCTACTGCATAAAGAGATGGCCTCGGATATAATCAGAATTGCACTCGAGAGCGAGACAAAGACTCACAAGAAGAAGCTAATGGAGGAGTTCGTTTGGGCTGTGTACTGCAATGGCAGAAAGATTGGATACTCGATTAGGAGGAAGCAAATGTCAGACGAGGAGCTTCATGTCATGCAGCTTCTGAGAGGAGTTTCAATGGGGGCAGGCGTGCTTCCTTGCCAGTCCGACAAGGACACCGCAGACGGGGAATTGACATACATGAGGGCCAGATTCGAGCGAGTGGTTGGGTCCAAAGATTCCGAGGCTTTGCACATGATCAACCCAGATGGTGCTGGAGGTCCTGAGTTGAGCATTTTCTTTGTAAGAGTTCATTAG 687 0.5138 MPSVHSGPCYQMENPALLSLLRPTSNEKRSKSSGGFFRMFKLFPLLTSGCKMVALLGRPRRPQIGDSATTGTIFGYRKGRVSLAIQDDPHCVPMFIIELPMLTSLLHKEMASDIIRIALESETKTHKKKLMEEFVWAVYCNGRKIGYSIRRKQMSDEELHVMQLLRGVSMGAGVLPCQSDKDTADGELTYMRARFERVVGSKDSEALHMINPDGAGGPELSIFFVRVH* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0923 228 PANTHER PROTEIN MIZU-KUSSEI 1 26 227 IPR006460 GO:0010274
Vvi18g0923 228 Pfam Protein of unknown function, DUF617 70 226 IPR006460 GO:0010274
Vvi18g0923 228 NCBIfam uncharacterized plant-specific domain TIGR01570 69 227 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0923 Vvi-Chr18 9477895 9478581 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0923 - - vvi:100245545 461.455