Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0919 ATGGCGAATATTGCATTGAACATCTGGTTTTCTCTGTGTTGCTTGGTGGGATTGGTTCAGTGTTGTGGAGGCAGAGGATTCAATCCAATAGGAAAGCTCATAAGAGAGGGATTGTCGAAGGGTAGGTTGTCGGACGAATGGACGTGGACGAGTTTTCCATTGAATACAACCAGCAAGTTCCCTCTGGATGGGTTGAAAGAGAGCCATAAGATTGAAAGCTTGCCTGGACAACCCAATGGAGTGGACTTCGATCAGTTCTCAGGGTATGTTACGGTGGATTCTCTGGCAGGGCGTGCATTGTTCTATTATTTTGTGGAGTCACCTCAGAACTCGACTACTAAGCCCCTTGTGCTGTGGCTGAATGGAGGTCCTGGTTGTTCTTCATTTGGAATTGGAGCAATGATGGAACTGGGTCCATTTAGAGTCAACAAAGATGGAGAAACTCTATATCTAAATAAACATGCATGGAACAAAGAGGCCAACATCATCTTCCTTGAGTCCCCAGCCGGGGTGGGATTTTCTTACTCAGACACAGCATCCGATTATAATTCAAGCGGGGACTACAGGACTGCCTCAGATTCCTACATTTTTCTCCTTTCATGGCTGGAGATATTTCCTGAATACAAGACAAGGGATTTCTTCATTGCTGGAGAGGGCTATGCAGGTCATTATGTGCCCCAGCTTGCACAGACCATCCTTCTATTCAACAGTATTCCAGACCTACCTATAATCAATCTTAGAGGAATTGCCATGGGTAATCCATATGTGGATCGGGAAACGGCTTTTAAGGGAATTGTGGACTACTATTGGAGCCATGCTCTCATTTCAGATGAAATATACATGGAACTTATATTGAACTGCAATGTTTCTTCAGAAGAATCTGCATCAGAAGAGTGCATAGCATGGCTTCTTCAAGCAGATAACGCTATGGGCAACATCAATGTCTATGATATCTATGCCCCCTTGTGCAATTCTTCAGCGGACTCCAATTCTGTGAGTGCATTCGATCCCTGCTCGGGGAATTACATCCATGCTTACTTGAACATTCCTCAAGTTCAAGAAGCACTTCATGCAAACGTTACTGGTCTTCCATGTCCATGGGAATTCTGCAGGCAATGCCACCCAACCAAGTGCAACATTTATGATAGTCCAGCAACTATGCTGCCCAGCATTCAGGAGCTGATGAGCAGCGGAATACAAGTGTGGATATACAGGCAAGGGATCTGA 1227 0.4499 MANIALNIWFSLCCLVGLVQCCGGRGFNPIGKLIREGLSKGRLSDEWTWTSFPLNTTSKFPLDGLKESHKIESLPGQPNGVDFDQFSGYVTVDSLAGRALFYYFVESPQNSTTKPLVLWLNGGPGCSSFGIGAMMELGPFRVNKDGETLYLNKHAWNKEANIIFLESPAGVGFSYSDTASDYNSSGDYRTASDSYIFLLSWLEIFPEYKTRDFFIAGEGYAGHYVPQLAQTILLFNSIPDLPIINLRGIAMGNPYVDRETAFKGIVDYYWSHALISDEIYMELILNCNVSSEESASEECIAWLLQADNAMGNINVYDIYAPLCNSSADSNSVSAFDPCSGNYIHAYLNIPQVQEALHANVTGLPCPWEFCRQCHPTKCNIYDSPATMLPSIQELMSSGIQVWIYRQGI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0919 408 Gene3D - 338 373 - -
Vvi18g0919 408 Pfam Serine carboxypeptidase 75 405 IPR001563 GO:0004185|GO:0006508
Vvi18g0919 408 FunFam Carboxypeptidase 64 333 - -
Vvi18g0919 408 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 175 IPR001563 GO:0004185|GO:0006508
Vvi18g0919 408 PRINTS Carboxypeptidase C serine protease (S10) family signature 201 226 IPR001563 GO:0004185|GO:0006508
Vvi18g0919 408 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 164 IPR001563 GO:0004185|GO:0006508
Vvi18g0919 408 Gene3D alpha/beta hydrolase 64 335 IPR029058 -
Vvi18g0919 408 SUPERFAMILY alpha/beta-Hydrolases 68 404 IPR029058 -
Vvi18g0919 408 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 69 396 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0919 Vvi-Chr18 9425432 9427155 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0919 K16297 - vvi:100260923 796.578