Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0917 ATGGCTCACCTCTCTCTCTCCTCTCTCTCTCCTCCACCGTCTTCTTCTTCGTCTCCGCCCCTGCGACTTCACGGGAGAATCTTTTCTCCCTTCTGCCGAGTCCAAGTTTCTTCCTCTTCTACTTCCTACTTGCAGCCGAAAGTCGTTGTTACCAGAGAACATGGCAAGAATGGCAAGCTTATCAATGTTCTGGCTGAACATGGGATTAACTGTTTGGAGTTTCCACTCATTCAACACACAAAGGGACCTGATTTGGATAGGCTTTCTTCTGTATTAAGTGCAGATACTGCATTTGACTGGATCATCATAACTTCACCTGAAGCGGGTTTGGTCTTTCTCGAGGCATGGAAGGCTGCTGGAGCCCCGTGCGTAAAGGTTGGTGTTGTAGGATCTGGTACACAAAGTGTATTTGAAGAAGTAATGCAGTCCTCAAAGCAATCACTCAGAGTTGCATTTGCCCCATCAAAAGCGACAGGTAAGGTTTTGGCTTCAGAGCTTCCAAAGGATGGGAACAGAACATGCACAGTATTATATCCTGCATCTGCAAAAGCTAGTGGTGAGATTGAGGAAGGCCTGTCTAGTCGTGGATTTGAGGTCACAAGGCTGAACACATACACAACGGTACCTGTCAATGATGTGGATGAAATGGTTTTCAAGCAAGCACTTTCTGCTCCTGTTGTTGCAGTAGCTTCACCATCTGCAGTTCGTGCTTGGGTCAATCTTCTTTCAGAATCTGAGCGGTGGGGCAATGCAGTTGCCTGTATTGGTGAAACAACTGCTTTGGCTGCAAAAAGATCAGGCTTGAGAAATGTATACTACCCAACAAATCCAGGTCTAGAAGGTTGGGTTGACAGCATCCTTGAAGCCTTGAGAGTACATGATCGATTCCAGAAGATAAATCAAGTTGTCTCTCCTTAG 918 0.4619 MAHLSLSSLSPPPSSSSSPPLRLHGRIFSPFCRVQVSSSSTSYLQPKVVVTREHGKNGKLINVLAEHGINCLEFPLIQHTKGPDLDRLSSVLSADTAFDWIIITSPEAGLVFLEAWKAAGAPCVKVGVVGSGTQSVFEEVMQSSKQSLRVAFAPSKATGKVLASELPKDGNRTCTVLYPASAKASGEIEEGLSSRGFEVTRLNTYTTVPVNDVDEMVFKQALSAPVVAVASPSAVRAWVNLLSESERWGNAVACIGETTALAAKRSGLRNVYYPTNPGLEGWVDSILEALRVHDRFQKINQVVSP* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0917 305 Gene3D - 94 199 IPR036108 GO:0004852|GO:0033014
Vvi18g0917 305 Pfam Uroporphyrinogen-III synthase HemD 60 283 IPR003754 GO:0004852|GO:0033014
Vvi18g0917 305 MobiDBLite consensus disorder prediction 1 20 - -
Vvi18g0917 305 FunFam Uroporphyrinogen-III synthase chloroplastic 38 166 - -
Vvi18g0917 305 SUPERFAMILY HemD-like 47 291 IPR036108 GO:0004852|GO:0033014
Vvi18g0917 305 Gene3D - 200 292 IPR036108 GO:0004852|GO:0033014
Vvi18g0917 305 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 1 294 IPR039793 GO:0004852|GO:0006780
Vvi18g0917 305 CDD HemD 48 286 IPR003754 GO:0004852|GO:0033014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0917 K01719 - vvi:100250675 561.222