Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0911 ATGCTTCGTCTCTGGAATAGAAGCCGCACCTCTCTTCTTCGTTTCTCTATCCCTCGTCCCTTCTCTTCTTCTCCAAACAATTCCATTGAATGCCCTAACCATCTCAATCAATCACATCAAGTCCCTCCTCCTCCGCCAATACTTCACCACTTAAACCCCCTGTCTCCTCTCCCCACAACTCTCTCTCGCCCCTCCCTCCTTGCCGTTTCTGCAACCCTAATATCCGCTGTCATCGCTACTTGCGCTCTCGTCTCCGTTCCCACCGACGATGAATCCAAATCCGGACCACGCCATCTCTACGCCGATTTTGAACAGGCGATTGATAAGTCCAATGATTCTCTCAAAAGGATCGTGAATCGGATGAAGCAGACCGGCGTCGCCGCCTCGGTTCTATGGCAGTCATTGACGTCGGTGCTGTCTTCGGCCAATTATGAGGTCCGTTCAGGGTTCGAGCTTAAGGTTGCGGCGCTTCTGGCTGACATTGCGGCCGCTAATGCCAGCCGGCGGCAGGCGATTGTTGGAGCCGGTGGCGGTAAGGTTTTGGATTGGTTGCTTGAGACGGTGGCGGTTTCCGGTGATAATGCCGGGACTCAGGGGGAGTCGGCGAGAGCGCTGGCTCACTTGCTTGGGGATCCTAATGTGTGTGAGGCAGTGCTTGGGAGGCCTGATGCAGTTCCCAATCTGTTGAGGTTTATTTTTTCTTCTCAGCCTCAAACTTCAAAGAAGCATGCAAGACGTAGTTCATTGGATGTTTCTGATTCTTTGAAAGGTAGGAGCATGCTTGTTGCTGCCATTATGGATATCGTGACTTCCAACTGCGATAGTTTAGAAAAAGTGTCATTTCAGCCATCCCTGCCAGGAAATGCAAAAATGAGAGATATTGCAGCTGCCATTGAAGTTATTGAGGATGGCAGTATGCATTTTGATGAGCCACATGTAAATGCAGAAAGTGATGATGGTGGAAAAGGAATGCGAGGTATTGGAATTAAAATTCTTGGAGGTACAACGGTTTTAGGGCTTTCAAGAACTCATGGTCTTATGAAGTTGGAGCATTCTGATGCCAATCACCTAGAATCAAATAGATATGATCCTAAAACCCATTTGCTGCAAAAAAATCATGCTGGTTCACTAGCACAAGCAAATTTATCTTCTTCTGTTCCTGGTCTGTGGGATGATCTGAGGTCTCAACATGTTGCTGTGCCTTTTGCTGCATGGGCATTAGCTAATTGGGCTAGGGCATCAGAGGTGAATAGAACTCATATTCAAGAACTGGATCAAGATGGGCATGCTGTCATGGCTGCTTTAATGGCGCCTGAGAGAACAGTGAAATGGCATGGGAGTTTGGTGGCTCGGTTGCTATTGGAGGATAACAATCTCCCATTAAATGATTCTGTTTCTGATTGGAGTTCCAGTCTTCTTTCTACTGTTTCTCAGGCAAGTAAAACTGAAGACATTTCTTTGGCTCAGGTGGCTTTGTCTGCGTTTTTGCTTTCTGTTGAGAAAAGCGTTGGAGCGCAGAAGGTAGTAATGGAGAAGGGCCTTCATCTGATGAGGGAAACTGCTAAATCAACAACGAAGCATAAGCATGTGCAGGAAGCATTGGCCAAGGCTTTAGAATTGCTTTGTACTGGAAAAATGCATTTATCTTTTGAAGAGAGTCAAATGTGGTCTGGAATATTGATTCCTTGGGTTTTTGGAAAATCTTCCTCTGACACAATGCGATCTTCAGCCACAAAAATTCTTTCATGCATTCTTGAAGACTATGGACCATCAGCTTTACCAGTCTCTCAAGGATGGTTAGCTATGCTGCTAACTGAAATTCTAGGCTCCCACAAGCAATCAGTCAAAGGAAGCGCTCCCCCAAAATCCGATAAAGTGAAGACTCAAATTGATCAGGCAAACATTCTCTCTGCTACACAGACTGCTAATCAATTGGTGGGTGCTGTTGTTGATCTGGCTGGAAATCAACTGCGAACCATCAACAATTCTGTTGATACCTTCCCCCTGTCAGATCTTCTTTCTCTTGAACCTTTTGTGGGACGATTTAAAAACCTTAACAAAGATAACTTGCCCAAACTTGATGCTGCAGACTCTGCACTCGCAACCCTTAAGGGGATCAAAGCACTAACTGAAATTTGTGCTGGAGATTCTGAATGTCAAAACGAAATAGTTGATTTTGGAGTCCTGTGTTTGCTAAGGCGCTTTTTGCTGCGAGATGATTATGAGCAACTGGCTGCAATTGAAACATATGATGCATCAAGAGTCATGGAGACCCAGGAGAGGGTTTCAAGTGTTCCTGGTGAATCACATGTTTCAGATATTAATGATCCATCAAGTGTTCGAGTTCCACGTACAGCTCACATTAGAAGGCATGCAGCTCGGCTGCTAACTATACTCTCAGTCCTTCCAAAGGTCCAGAAAGCCATTGTAGTGGATGAAAATTGGTGTAAGTGGCTTGAAGAATGTGCTAATGGGAGTATTCCAGGATGCCATGACTTCAAAATTCAAAGTTATGCCAGGGCTACACTGTTGAACGTATTTTGCACTGATCAGACCAATGTAAATGCTGGGAATGATAAATTTCCTGATACTGATATTATGAACCAAAACCGCATTTGCCCACGTTATGATGACATGATATTTCTAATCAATCCTGAACTGCCACATTGGAATTGTTATAAAAAAGTTGACTCAGACACTGTCCAAAGGATGCCAACAGAAAAACCAAAATCTGATGATAAATCATCATCAAGTGATGATGATTCTATTGATGGTAATGGTAGACCTTTAACCACGGTTTCCAATAATGGTAACTTGTCTACTTCTACTCATGGATCAGACAGCTATTCATCATCAGAGTCTCCCCCATTAGATGTTGTTTTTGTTCATGGCCTGCGTGGAGGACCTTTTAAAACTTGGCGAATAACTGAGGACAAGTCCTCCACTCAGTCTGGCCTTGTAGAGAAGATTGATCAGGAAGCCGGAAAGCAAGGAACCTTTTGGCCAAGAGAATGGCTTGCAGCTGAATTCCCTCATGCACGATTGTTTTCTCTTAAGTACAAGACAAATCTTACCCAGTGGTCTGGAGCTAGTCTGCCTCTTCTGGAAGTCAGCTCCATGCTGTTAGATAAGCTCGTAGCTGCAGGCATTGGGAACCGGCCAGTCGTGTTTGTGACTCACAGCATGGGAGGCTTGGTTGTTAAGCAGATGTTGCATCAAGCGAAGGCAGAGAATATTGATAACCTTGTTAAAAACACCATTGGAATTGTATTTTATAGCTGCCCACATTTTGGCAGCAAACTTGCAGACATGCCTTGGCGAATGGGCTTTGTGTTTCGCCCAGCTCCCACAATAGGGGAGTTAAGAAGCGGATCTCCCAGATTAGTAGAGCTTAATGATTTTATTCGTCACCTTCATAAGAAAAAACAGCTCGAGGTTCTCAGTTTCAGTGAGACCAAGGTAACTCCAATTGTAGAAGGTTATGGAGGATGGGCCTTCCGAATGGAAATCGTGCCAATTGAATCAGCATACCCTGGATTTGGTGAACTCATTGTATTGGAGTCAGCAGATCATATAAATTCATGCAAGCCAGTCAACCGCACCGATCCATCTTATACAGTGACGTTGGATTTCTTACGTAAACTGAAAGCCCGGTTGACACCATAA 3666 0.4468 MLRLWNRSRTSLLRFSIPRPFSSSPNNSIECPNHLNQSHQVPPPPPILHHLNPLSPLPTTLSRPSLLAVSATLISAVIATCALVSVPTDDESKSGPRHLYADFEQAIDKSNDSLKRIVNRMKQTGVAASVLWQSLTSVLSSANYEVRSGFELKVAALLADIAAANASRRQAIVGAGGGKVLDWLLETVAVSGDNAGTQGESARALAHLLGDPNVCEAVLGRPDAVPNLLRFIFSSQPQTSKKHARRSSLDVSDSLKGRSMLVAAIMDIVTSNCDSLEKVSFQPSLPGNAKMRDIAAAIEVIEDGSMHFDEPHVNAESDDGGKGMRGIGIKILGGTTVLGLSRTHGLMKLEHSDANHLESNRYDPKTHLLQKNHAGSLAQANLSSSVPGLWDDLRSQHVAVPFAAWALANWARASEVNRTHIQELDQDGHAVMAALMAPERTVKWHGSLVARLLLEDNNLPLNDSVSDWSSSLLSTVSQASKTEDISLAQVALSAFLLSVEKSVGAQKVVMEKGLHLMRETAKSTTKHKHVQEALAKALELLCTGKMHLSFEESQMWSGILIPWVFGKSSSDTMRSSATKILSCILEDYGPSALPVSQGWLAMLLTEILGSHKQSVKGSAPPKSDKVKTQIDQANILSATQTANQLVGAVVDLAGNQLRTINNSVDTFPLSDLLSLEPFVGRFKNLNKDNLPKLDAADSALATLKGIKALTEICAGDSECQNEIVDFGVLCLLRRFLLRDDYEQLAAIETYDASRVMETQERVSSVPGESHVSDINDPSSVRVPRTAHIRRHAARLLTILSVLPKVQKAIVVDENWCKWLEECANGSIPGCHDFKIQSYARATLLNVFCTDQTNVNAGNDKFPDTDIMNQNRICPRYDDMIFLINPELPHWNCYKKVDSDTVQRMPTEKPKSDDKSSSSDDDSIDGNGRPLTTVSNNGNLSTSTHGSDSYSSSESPPLDVVFVHGLRGGPFKTWRITEDKSSTQSGLVEKIDQEAGKQGTFWPREWLAAEFPHARLFSLKYKTNLTQWSGASLPLLEVSSMLLDKLVAAGIGNRPVVFVTHSMGGLVVKQMLHQAKAENIDNLVKNTIGIVFYSCPHFGSKLADMPWRMGFVFRPAPTIGELRSGSPRLVELNDFIRHLHKKKQLEVLSFSETKVTPIVEGYGGWAFRMEIVPIESAYPGFGELIVLESADHINSCKPVNRTDPSYTVTLDFLRKLKARLTP* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0911 1221 Gene3D - 366 860 IPR011989 -
Vvi18g0911 1221 Gene3D - 106 279 IPR011989 -
Vvi18g0911 1221 SUPERFAMILY ARM repeat 133 847 IPR016024 -
Vvi18g0911 1221 MobiDBLite consensus disorder prediction 922 954 - -
Vvi18g0911 1221 MobiDBLite consensus disorder prediction 901 921 - -
Vvi18g0911 1221 MobiDBLite consensus disorder prediction 901 954 - -
Vvi18g0911 1221 SUPERFAMILY alpha/beta-Hydrolases 953 1216 IPR029058 -
Vvi18g0911 1221 Gene3D alpha/beta hydrolase 953 1201 IPR029058 -
Vvi18g0911 1221 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 1219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0911 Vvi-Chr18 9336602 9345733 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0911 K23504 - vvi:100257358 2248.01