Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0903 ATGGAAGAAAAAAAATCAATCCACAAACCCTCGACTTATGGAAAGTTAATCACCATTCTCAGCATTGATGGAGGTGGAATACGAGGAATTATTCCAGGGACTATCCTCAGCTTCCCAGAGGCGGAGCTTCAGAAACTGGATGGTGAGGATGCAAGAATAGCAGACTATTTCGATGTGATCGCAGGGACAAGCACAGGTAGTCTCATCACTGCCATGCTTACTGCACCAAACATAAATAACCGCCCTTTGTTTGCAGCCATAGATATCCAGCACTTTTACCTTGAGCACTGCCCTAAAATATTCCCTCAGAACAGTTGTCCATTTGCTAACATTGCGGCAGTGATCAGAGCGCTACTAGGACCAAGATACAATGGCAAATATCTTCATAGCCTAGTGAGGGAAAAATTAGGAAACATCCGATTACACCAAACCTTGACTAAGGTTGTAATCCCAACATTTGACATCAAACTACTGCAGCCAACCATCTTCTCTAGCTTTAAGGTGAAACACGACCCAACCATAGATGCCTCACTCTCGGATATATGCATGGGAACTTCAGCTGCTCCAACTTATCTCCCAGCCCATCTTTTTGAAACCAAAGATTATGCCACTGAAAGGGCTAGAACATTCAATCTTATCTATGGTGGTGTAGCTGCTAACAATCCGGCTTTAATTGCTATGGGTGAAGATGATACATTGAACCATGTATTATCTTCCGTTGATTATGCTACTAAGGATAATTTGTATAATCTGGTGAAAGTATCTGAAGGATTGTTGAAGAAACCAGTTTCAAGGGTGAACTTGGAAACTGGGAATTTGGAGCCTTCAAGTAAAGAGACAAATGAAGACGCTCTCATAAGGTTTGCAAATATACTGTCAAAAGAGAAGCGCCTTCGTGATGCCAAACCATGGATGGATGTGCAACAGATTAACCGCAAATAA 942 0.4204 MEEKKSIHKPSTYGKLITILSIDGGGIRGIIPGTILSFPEAELQKLDGEDARIADYFDVIAGTSTGSLITAMLTAPNINNRPLFAAIDIQHFYLEHCPKIFPQNSCPFANIAAVIRALLGPRYNGKYLHSLVREKLGNIRLHQTLTKVVIPTFDIKLLQPTIFSSFKVKHDPTIDASLSDICMGTSAAPTYLPAHLFETKDYATERARTFNLIYGGVAANNPALIAMGEDDTLNHVLSSVDYATKDNLYNLVKVSEGLLKKPVSRVNLETGNLEPSSKETNEDALIRFANILSKEKRLRDAKPWMDVQQINRK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0903 313 Gene3D Cytosolic phospholipase A2 catalytic domain 4 304 - -
Vvi18g0903 313 PANTHER XYLOSE ISOMERASE 229 301 - -
Vvi18g0903 313 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 20 227 IPR002641 GO:0006629
Vvi18g0903 313 SUPERFAMILY FabD/lysophospholipase-like 16 258 IPR016035 -
Vvi18g0903 313 Pfam Patatin-like phospholipase 20 227 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0903 Vvi-Chr18 9249032 9251242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0903 229 302 Miscellaneous Gene Families AT2G26560 54.054 2.30e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0903 - - egr:104451079 394.815