Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0900 ATGGGAGAAGGACCAAAATCACCCCTACAGCCTCCAACTTATGGAAACCTAATCACCATTCTCAGCATCGATGGAGGTGGAATAAGAGGGCTTATCCCAGGAACAGTCCTTGGCTTCCTGGAGTCTGAGCTTCAGAAGCTGGATGGTGAAGACGCGAGAATTTCAGATTATTTTGATGTGATTGCAGGAACAAGCACCGGTGGCCTCGTGACTGCCATGCTAACTACTCCCAATGAAAACACTGGCCGACCCTTGTTTTCTGCCAAAGATATCAAGGACTTCTACCTTGATCACTGCCCTAAGATCTTCCCACAGCACAGTCATGATCCAATTCCTCATGATGATACATTGAGCGGTATAACATCATCAGTCGACATAGCCACAAAGGAAAATTTGGATGATCTTGTGAAAATTGGTGAGGAGTTGTTAAAGAAAAGGGTCTCAAGGGTTAACCTGGATACAGGTATCTTTGAGCCTTCAAATCACGAGACCAACGAGGAGGCTCTCACAAGTTTTGCAAGACTACTCTCCCAAGAGAAGCAACGTAGAGATACTAGGTCACCACATGGACATGCTGCCGCTTCTAAAGGATTGGTCGTTGTCTGA 606 0.4604 MGEGPKSPLQPPTYGNLITILSIDGGGIRGLIPGTVLGFLESELQKLDGEDARISDYFDVIAGTSTGGLVTAMLTTPNENTGRPLFSAKDIKDFYLDHCPKIFPQHSHDPIPHDDTLSGITSSVDIATKENLDDLVKIGEELLKKRVSRVNLDTGIFEPSNHETNEEALTSFARLLSQEKQRRDTRSPHGHAAASKGLVVV* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0900 201 PANTHER XYLOSE ISOMERASE 113 184 - -
Vvi18g0900 201 MobiDBLite consensus disorder prediction 179 201 - -
Vvi18g0900 201 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 21 201 IPR002641 GO:0006629
Vvi18g0900 201 SUPERFAMILY FabD/lysophospholipase-like 17 105 IPR016035 -
Vvi18g0900 201 Pfam Patatin-like phospholipase 21 94 IPR002641 GO:0006629
Vvi18g0900 201 FunFam Patatin 7 137 - -
Vvi18g0900 201 Gene3D Cytosolic phospholipase A2 catalytic domain 10 111 - -
Vvi18g0900 201 Gene3D Cytosolic phospholipase A2 catalytic domain 112 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0900 Vvi-Chr18 9187360 9188756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0900 87 192 Miscellaneous Gene Families AT2G26560 49.057 2.27e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0900 - - vvi:109121419 238.424