Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0896 ATGGAGAAATCACTCTTACCTCAAATCCAGCCCCCAACTTATGGTAACCTAGTCACCATTCTTAGTATTGATGGAGGTGGTATCAGGGGCATCATTCCTGCAACTATCCTTGCTTGCCTGGAACCTCAACTTCAGTATGAAAAGCATGAGGTTAATAGGTCAAAAAAAATCATGTCTAACGGGAAATTATGTAAAACCTTGCTGCTTGACATTGAATTATCCGTTCCTTGTCATTCACGGTGCAAGTGCCGCGTTGGCCAGTACTTTTCGTTGCCCTAG 279 0.4337 MEKSLLPQIQPPTYGNLVTILSIDGGGIRGIIPATILACLEPQLQYEKHEVNRSKKIMSNGKLCKTLLLDIELSVPCHSRCKCRVGQYFSLP* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0896 92 SUPERFAMILY FabD/lysophospholipase-like 16 44 IPR016035 -
Vvi18g0896 92 PANTHER XYLOSE ISOMERASE 7 49 - -
Vvi18g0896 92 Gene3D Cytosolic phospholipase A2 catalytic domain 8 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0896 Vvi-Chr18 9117968 9130552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0896 9 45 Miscellaneous Gene Families AT2G26560 81.081 1.91e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0896 - - vvi:100267749 89.7373