Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0884 ATGTGGGGGTTTGGGGGTAAGTTTTATTGGGGAAGAAATGAGACGGCTGGGAAGATTGAAGGAATCGTGGTGGTATTCGCATGGATGTCGAGTCAGGAGAAGCACTTGAAGAACTATGTGCAGCTCTACTCGTCTCTGGGTTGGAATTCCCTCATTTGCCATCCAGAATTTCTCAATGTATTCTTTCCTGAGAAGGCCACATCCCTGGCGTCTGACATTCTTAATGAGCTTGTTAAGGAGCTAAAGACTAGGCCATGCCCAGTTGTCTTTGCATCTTTTTCTGGTGGTCCAAAAGCCTGCATGTACAAGGTTCTTCAGATAATCGAGGGAAAGTGTGAAGCACAACTCAATCCGGATGAATATCGGCTTGTTAGAGACTGTGTTGCTGGCCACATCTATGACTCTTGTCCAACAGATTTTACCAGCGATGTGGGTACTCGATTTCTCCTTAAACCAACTGTTCTCAAAGTGCCCCATCCTCCTAGACTAGTATCATGGATTGCAAATGGTATTGCTTCTAGTCTGGATGCGCTCTTCCTCAATCGGTTTGAATCACAGCGTGCTGAATACTGGCAAACTCTGTACTCCTCTATTTTCATGGGGGCCCCATATCTCATTTTATGCTCAGAGGATGATGACCTTGCTCCCTATCAAATTATCTGCAATTTTGCTCAGCGATTACAAGAACTTGGGGGTGACGTGAAGCTGGTGAAATGGAACAGCTCTCCTCATGTAGATCATTATCGGTATCATATGATTGACTACAAGGCTGCAGTGACTGAGCTTCTTGAAAAGGCAGCTATAATATATTCCCAAAGAATTCGCAGACTAGAAGCAGAAAGGATGAGCTTGGAAGTACATGATGAGACATCCAGCCCCATTTGCCAGCCAAAGAAAGCAACAACAAGCTCAAATGAGTGCTTTGGGAGGGTTGCACTGGAGTTGAATGATCACTTCATCTCACCTAGCTCATTGGAGTATCAGGAGGGTAGAAATGTTGGGTCGGTGCGAAATGAACACAAGGAAGGTTTGATCCATCTGTCAAGCCTGCCAAGCATCAACGCCCATGGAGTTTTTGGTCAAATCCTTTTTGATGTCTGCGTTCCCAAAGACGTTGAAGATTGGGATATAAGGTCATCAGGCTCCTCAAATGCACCTGCATCTGCTCGGACACGGAGGCACGCCCCTTTCAACCCCATTAGATGTATACGACGCTCAAGATTATAG 1227 0.4564 MWGFGGKFYWGRNETAGKIEGIVVVFAWMSSQEKHLKNYVQLYSSLGWNSLICHPEFLNVFFPEKATSLASDILNELVKELKTRPCPVVFASFSGGPKACMYKVLQIIEGKCEAQLNPDEYRLVRDCVAGHIYDSCPTDFTSDVGTRFLLKPTVLKVPHPPRLVSWIANGIASSLDALFLNRFESQRAEYWQTLYSSIFMGAPYLILCSEDDDLAPYQIICNFAQRLQELGGDVKLVKWNSSPHVDHYRYHMIDYKAAVTELLEKAAIIYSQRIRRLEAERMSLEVHDETSSPICQPKKATTSSNECFGRVALELNDHFISPSSLEYQEGRNVGSVRNEHKEGLIHLSSLPSINAHGVFGQILFDVCVPKDVEDWDIRSSGSSNAPASARTRRHAPFNPIRCIRRSRL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0884 408 Pfam Eukaryotic protein of unknown function (DUF829) 128 375 IPR008547 -
Vvi18g0884 408 Pfam Eukaryotic protein of unknown function (DUF829) 22 100 IPR008547 -
Vvi18g0884 408 PANTHER UNCHARACTERIZED 16 267 IPR008547 -
Vvi18g0884 408 SUPERFAMILY alpha/beta-Hydrolases 125 265 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0884 Vvi-Chr18 9033017 9038302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0884 - - vvi:100243704 840.876