Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g0877 | ATGGGCAAGGATAATGTGCCATTCCTCACTGTGATGTTCCCATCTACACTTATTGGAGCTGGAGAAAACTGGACATTGATGAAGAGCATTAGTGTTACAGAATACTTAAACTATGAAGTAGGTACTCGTTAG | 132 | 0.4015 | MGKDNVPFLTVMFPSTLIGAGENWTLMKSISVTEYLNYEVGTR* | 44 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g0877 | 43 | PANTHER | METHIONINE--TRNA LIGASE | 1 | 40 | IPR023458 | GO:0004825 | |
| Vvi18g0877 | 43 | Gene3D | HUPs | 1 | 39 | IPR014729 | - | |
| Vvi18g0877 | 43 | Pfam | tRNA synthetases class I (M) | 1 | 39 | IPR015413 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g0877 | Vvi-Chr18 | 8971444 | 8971686 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g0877 | K01874 | - | vvi:100253638 | 81.6481 |