Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0868 ATGCCTATGTGGAATCCCAAATGTCTAGATCTTCCCCTCTCTGAAGAACAAAAACAACGTCTTCTCCAGAAATTTGACTTCGATAAAGATGGCCGACTAAGCAAGAAAGATTTGGAGCTCGGCTTGCGCCAGATGGGCCTTCGTTTCTGTAGGTGGAGAGCTGGAAGGGCTCTCCGCCATGCTGATCTTAACAAAGACCGATACATTAGCAAGGATGAGATAAACGAGCTAGTCAAATATGCGACCAAATGGGGGTTGCCCGCAAATTAG 270 0.4667 MPMWNPKCLDLPLSEEQKQRLLQKFDFDKDGRLSKKDLELGLRQMGLRFCRWRAGRALRHADLNKDRYISKDEINELVKYATKWGLPAN* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0868 89 Pfam EF hand 21 39 IPR002048 GO:0005509
Vvi18g0868 89 ProSiteProfiles EF-hand calcium-binding domain profile. 13 48 IPR002048 GO:0005509
Vvi18g0868 89 ProSitePatterns EF-hand calcium-binding domain. 62 74 IPR018247 -
Vvi18g0868 89 Gene3D - 7 83 - -
Vvi18g0868 89 ProSitePatterns EF-hand calcium-binding domain. 26 38 IPR018247 -
Vvi18g0868 89 SUPERFAMILY EF-hand 12 80 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0868 5 83 EF-hand Containing Proteins AT1G18210 30.864 4.86e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0868 - - nsy:104225990 103.99