Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0866 ATGGTGTTAGAAGGAGTGAGTGTTCCGAAGATGTTGATCAAGGTCACTCCTTCAAAAGCTTTGGTTCTTAAAATCAACCTGGTCTTCCTCGCTTTCTTCGTAGTTGTCTATGCTGCTCTTCTTCTCCGGCCATCTTTGTCTGTGTATCATGAAAATGCTGCAGCACTTGTCCGGTGCACTTTGCGGGAGTGCAATCACAAGGCGGAAAAGGGGGTTAAGATGAAGGCAGCTTTGGAAGAGAATCAAGCAGATCAAGCCATGGCTGCCAAAAGGAAAATGGTCAAGAGCGAGAAACCAAGCTTCTTGAATGAAATGAGGAAAGGGATGAGGATAGGAATGGTGAACATGGATGACGAGGATGTGGGTGAGTGGAAAGTTCATGGAGAAATTGTCCATGTCCATTTCCAACAGGTATCGGAGTTGTTCAACTGGACAGATTTGTTCCCGGAGTGGATTGATGAAGAGGAAGAGAAGGAGGGTACAATGTGTCCGGAGATACCAATGCCCGATTTCAGGCGTTATTGGGATATGGACTTGATAGTGGCCAAATTGCCATGCAAGTACCCAGAAGAAGGGTGGCGCAGGGACGTGTTCAGGCTGCAAGTTCACCTAATAGCGGCCAATTTGGCGGTGAAGAAAGGGAGGAGAGACTGGAATTGGAGGACCAAGTTGGTGTTTCTGAGCAGGTGCAGGCCAATGATGGAGCTTTTTAGGTGTGATGATTTGGTGAGACAAGAAGGGGATTGGTGGTTCTACCAACCGTCAGTGGCAAGGTTAGAGCAGAAGGTTTCATTGCCTGTTGGCTCCTGCAAATTGGCTTTGCCTCTCTGGGCAAAAGGGGTGGACAAGGTGTTTGATCTGTCCAAGATCAAAGCAGACACGAGGAGTGTTAAACGAGAAGCATATGCCACAGTTCTACATTCCTCCGATACCTACGTTTGTGGAGCCATTACTCTCGCCCAGAGTCTCCTTCGAACAGGCACCAAACGCGACCTCCTCCTCCTCCTCGACAGCTCCATCCCTGTCTCCAAACGCGACGCCCTCGCTGCTGCTGGCTGGCAGATCCGACTCATCAAGCGAATCCGAAACCCTAAAGCCGAGAAAGACTCCTACAATGAGTACAACTACAGTAAGTTCAGGTTATGGCAGCTCACCGAATACGACAAGATCATCTTCATTGACGCCGACATCATCGTTCTCCGCAATCTCGATCTCCTCTTCCACTTCCCTCAAATGTCCGCCACCGGCAACGACGGCTCCATCTTCAACTCCGGCATCATGACAATCGAACCTTCCAACTGCACCTTTCGGATCCTCATGAATCATATCAAAGACATAGTTTCCTACAACGGCGGTGACCAAGGTTTTCTTAACGAAGTCTTCGTCTGGTGGCATCGCTTCCCCAAGAGAGTCAATTTCCTCAAGAACTTTTGGTCCAACAGTACAGTTGAAGCTGGCGTGAAGAACCAGCTCTTTGGTTCAGACCCGCCCAAACTTTATTCCATACATTATCTAGGGTTAAAGCCCTGGCTTTGCTACAGGGACTATGATTGTAATTGGGACATAGAAAACCAGCTTGTGTATGCAAGTGATGTCGCCCACCACAGATGGTGGAAGCTTCACGATGCCATGGATGAGAGCTTGCAGACATTTTGCGGGTTATCGGAGCGGAGAAAAATTGAGTTGGCATGGGATAGAAAGGTGGCTGGAGAAAGGGGACTACGTAACCAGCATTGGAGTATCAACGTTACGGATCCCAGACGGTTTCTTTGA 1773 0.4873 MVLEGVSVPKMLIKVTPSKALVLKINLVFLAFFVVVYAALLLRPSLSVYHENAAALVRCTLRECNHKAEKGVKMKAALEENQADQAMAAKRKMVKSEKPSFLNEMRKGMRIGMVNMDDEDVGEWKVHGEIVHVHFQQVSELFNWTDLFPEWIDEEEEKEGTMCPEIPMPDFRRYWDMDLIVAKLPCKYPEEGWRRDVFRLQVHLIAANLAVKKGRRDWNWRTKLVFLSRCRPMMELFRCDDLVRQEGDWWFYQPSVARLEQKVSLPVGSCKLALPLWAKGVDKVFDLSKIKADTRSVKREAYATVLHSSDTYVCGAITLAQSLLRTGTKRDLLLLLDSSIPVSKRDALAAAGWQIRLIKRIRNPKAEKDSYNEYNYSKFRLWQLTEYDKIIFIDADIIVLRNLDLLFHFPQMSATGNDGSIFNSGIMTIEPSNCTFRILMNHIKDIVSYNGGDQGFLNEVFVWWHRFPKRVNFLKNFWSNSTVEAGVKNQLFGSDPPKLYSIHYLGLKPWLCYRDYDCNWDIENQLVYASDVAHHRWWKLHDAMDESLQTFCGLSERRKIELAWDRKVAGERGLRNQHWSINVTDPRRFL* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0866 590 CDD GT8_Glycogenin 300 544 - -
Vvi18g0866 590 FunFam Hexosyltransferase 297 548 - -
Vvi18g0866 590 Pfam Glycosyl transferase family 8 305 409 IPR002495 GO:0016757
Vvi18g0866 590 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 548 IPR029044 -
Vvi18g0866 590 PANTHER GLYCOGENIN SUBFAMILY MEMBER 193 588 - -
Vvi18g0866 590 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 298 548 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0866 Vvi-Chr18 8883524 8885782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0866 74 588 Glycosyltransferase AT4G33330 66.219 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0866 K20890 - vvi:100266116 1208.36