Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0862 ATGGGCGGGGCTCACAGTCGCGAAGATCTGGAGATCTCCGATTCCGAATCTGAAGAAGAAGAAAACTACCAAGACGTTGTAGAAGAAGAAGAAAATGGAGAGAGATCTTCAGAGCGGAGAACCAAGACTCCCTCGTCGCTCGACGAAGTCGAAGCCAAGCTCAGAGCCCTTAAGCTCAAGTACCCCTCTCAAAACCACCCAATTCTCCCTAACGCCGTCAAGCTCTATCTTTACATTGGGGGAAACACACCCAAAGCCAAGTGGGTTACTTCAGAAAAACTCACTTCTTATTCCTTTCTCAAGACTTGTGGAAATGGCGGCTCAGACGACGATGAGCAAGATGATGAAGAGGGAGGAGAATCTTGGTGGATTTTGAAGGTTGGTTCCAAGGTTCGAGCCAAGGTGGCCCTGGAAATGCAATTGAAGACTTTCGGGGACCAGTGTCGCGTTGATTTTGTGTCACAGGGTGTGTGGGCGATGAAGTTCTTTAGTGAAGATGAGTACAGGAATTTTGTTGGTAAATTTCAGGATTGTTTGTTTGAAAACACGTACGGATTTGAATCAACAGATGCCAACAAGCTTAAGGTTTATGGGAAGGATTTTATTGGGTGGGTGAAGCCAGAAGTGGCAGATGATTCCGTATGGGAAGATGCGGAGGATGGTTACTTGAAAAGCCCTGATCCGGCAACTCCTGCGAGAGCAAGTCAGGATTTGAGGGAAGAGTTTGAGGAGGCTGCCAATGGAGGGGGGATACAAAGTTTGGCATTGGGTGCATTGGACAACAGTTTCTTGGTGAACGATTCTGGGATTCAGGTTGTAAAGAATTTCAGCCATGGGATTCAGGGGAAAGGTGTATTTGTGAATTTTGATAATGGGAATCGTAGAGGTGGTTTTGGCTTGGAGCATTCGACACCAAAAAAGGCTCTTCTTATGAGGGCTGAAACTAATATGCTCCTTATGAGTCCCATGACTGAGGGGAAGCCCCACACAAGGGGGCTTCACCATCTTGATATTGAAACTGGGAAGATTGTTACGGAGTGGAAGTTTGAGAAGGATGGGACTGATATTACCATGAGGGATATTACAAATGACAGTAAGGGAGCCCAGATGGATCCTTCGGGATCCACATTTTTAGGATTAGATGACAACAGGCTCTGTCGGTGGGATATGCGTGATAGAAATGGGATGGTTCAGAATCTATCAGATGCTAGTACCCCTGTATTGCATTGGACCCAAGGTCATCAGTTCTCTCGGGGTACCAACTTTCAGTGCTTTGCAACAGCTGGGGATGGATCAATTGTTGTTGGGTCTATTGACGGGAAGATCCGACTGTATTCAAACAACACTATGAGGCAGGCAAAAACTGCTTTTCCTGGCCTTGGTTCACCTATCACTCATGTGGATGTTACATTTGACGGGAAGTGGATATTGGGCACAACAGACACCTATTTGATCCTCATCAGCACTCTTTTCATTGACAAAGAAGGAAGGACAAAGACTGGTTTTGCTGGGCGTATGGGGAATAGAATCTCAGCCCCAAGATTGTTGAAGCTCACTCCTTTGGATTCGCATCTCGCTGGAGTAAACAATAAGTTCCGCGGTGCTCAGTTTTCGTGGGTCACAGAGAATGGGAAGCAGGAGCGCCACCTGGTTGCCACAGTAGGAAAGTTTAGTGTGATATGGAATTTTCAACAGGTGAAGAATGGCTCCCATGAGTGCTACCATAATCAGGAGGGCCTGAAGAGCTGTTACTGCTACAAAATTGTTCTCAAAGATGACTCCATAGTTGATAGCCGCTTCATGCATGACAAATTTGCTGTCAGCGATTCTCCTGAGGCTCCACTTGTGGTTGCTACCCACATGAAAGTGAGCTCCTTCAGTATATCCAGCAAGCGATGA 1899 0.465 MGGAHSREDLEISDSESEEEENYQDVVEEEENGERSSERRTKTPSSLDEVEAKLRALKLKYPSQNHPILPNAVKLYLYIGGNTPKAKWVTSEKLTSYSFLKTCGNGGSDDDEQDDEEGGESWWILKVGSKVRAKVALEMQLKTFGDQCRVDFVSQGVWAMKFFSEDEYRNFVGKFQDCLFENTYGFESTDANKLKVYGKDFIGWVKPEVADDSVWEDAEDGYLKSPDPATPARASQDLREEFEEAANGGGIQSLALGALDNSFLVNDSGIQVVKNFSHGIQGKGVFVNFDNGNRRGGFGLEHSTPKKALLMRAETNMLLMSPMTEGKPHTRGLHHLDIETGKIVTEWKFEKDGTDITMRDITNDSKGAQMDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLSDASTPVLHWTQGHQFSRGTNFQCFATAGDGSIVVGSIDGKIRLYSNNTMRQAKTAFPGLGSPITHVDVTFDGKWILGTTDTYLILISTLFIDKEGRTKTGFAGRMGNRISAPRLLKLTPLDSHLAGVNNKFRGAQFSWVTENGKQERHLVATVGKFSVIWNFQQVKNGSHECYHNQEGLKSCYCYKIVLKDDSIVDSRFMHDKFAVSDSPEAPLVVATHMKVSSFSISSKR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0862 632 SUPERFAMILY Putative isomerase YbhE 329 488 - -
Vvi18g0862 632 FunFam Vacuolar import/degradation Vid27-related protein 315 604 - -
Vvi18g0862 632 Gene3D - 333 594 IPR015943 GO:0005515
Vvi18g0862 632 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 630 IPR040458 -
Vvi18g0862 632 MobiDBLite consensus disorder prediction 1 47 - -
Vvi18g0862 632 MobiDBLite consensus disorder prediction 13 28 - -
Vvi18g0862 632 MobiDBLite consensus disorder prediction 29 47 - -
Vvi18g0862 632 Pfam VID27 C-terminal WD40-like domain 260 575 IPR013863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0862 Vvi-Chr18 8866981 8871158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0862 49 632 Acyl Lipid Metabolism Gene Families AT3G19240 68.919 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0862 - - vvi:100250552 1219.14