Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0860 ATGGCAAACTCCACTTCCCTCAAGTCCGACGCCGTGTTGGAGCAGATGAAGCTCCACCTTGCCACCGACGCCGGTAAACAACTCACCAAGAAGATCGGCCTCGTCTATCAGATCAACATCGCCCCTAAGAAAATTGGATTCAACGAGGAAATATACATTGTTGATCTCAAGAAAGGGGAAGTTACCAAAGGGCCGTACGAAGGAGGGAAGCCTGATGCCACCTTTTCTTTCAAGGATGAAGATTTTGTTAAGGTTGCCACTGGGAAGATGAATCCCCAAATTGCTTTTATGAGGGGCGCAATGAAGATAAAGGGCAGTTTGAGTGCAGCACAGAAATTCACTCCTGATATCTTTCCAAAGCCTTCAAAGATGTGA 375 0.4667 MANSTSLKSDAVLEQMKLHLATDAGKQLTKKIGLVYQINIAPKKIGFNEEIYIVDLKKGEVTKGPYEGGKPDATFSFKDEDFVKVATGKMNPQIAFMRGAMKIKGSLSAAQKFTPDIFPKPSKM* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0860 124 Pfam SCP-2 sterol transfer family 13 114 IPR003033 -
Vvi18g0860 124 Gene3D - 2 123 IPR036527 -
Vvi18g0860 124 SUPERFAMILY SCP-like 3 124 IPR036527 -
Vvi18g0860 124 PANTHER STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN 2 124 IPR039543 -
Vvi18g0860 124 FunFam Non-specific lipid-transfer protein-like 1 2 118 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0860 - - vvi:100245425 247.284