Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0854 ATGGCGATGGCTTACGTGGCTAGTTCACTGCTGCCTGTCCGCCTACATAGAAACCCCATCTCTCTCCACTTATCTCCTTCCCTTCGCTCTTTCCCTTCCCGTCAAACGACGTCGCTTCGACCAGTCCTATGTGCCCGGAAGCCTCGGTCCCCCGGTGGCAAACTCGGGAGCCAAGATGCCCGCGCTTCGGATTTTCTTAGGAAGCCGACTATCTCGCCTGGCGACGATGGCGGCGGCAGCAGTGTGAGGGAGAAGAGCTATAAGGGGAGGGAAGAAGAGGAATGGGTTGATTGGGAGGACCAGATTTTGGAGGACACTGTACCACTGGTTGGATACGTCAGGATGATAATTCATTCGGGAAAATATGAAAATGGTGATAGATTAAGTCTGGAGCATGAGAAGTTTGTTCTAGAGAAGTTGCTTGCATATCATCCAGAGTGTGAAAAGAAGATTGGTTGTGGAATTGATTATATAACGGTTACACCTGCCTGCTGTTGGATTGGATTAAGTTGTTCTTCTCTGTTGGATATCATCCTGACTTTGAAGGCTCACGATGTTTATTCATAG 567 0.4903 MAMAYVASSLLPVRLHRNPISLHLSPSLRSFPSRQTTSLRPVLCARKPRSPGGKLGSQDARASDFLRKPTISPGDDGGGSSVREKSYKGREEEEWVDWEDQILEDTVPLVGYVRMIIHSGKYENGDRLSLEHEKFVLEKLLAYHPECEKKIGCGIDYITVTPACCWIGLSCSSLLDIILTLKAHDVYS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0854 188 Pfam Protein of unknown function (DUF3223) 116 161 - -
Vvi18g0854 188 MobiDBLite consensus disorder prediction 39 88 - -
Vvi18g0854 188 Gene3D - 102 171 - -
Vvi18g0854 188 PANTHER PROTEIN EMBRYO DEFECTIVE 514 83 161 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0854 Vvi-Chr18 8775213 8779033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0854 - - vvi:100252324 328.561