Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0852 ATGGAAGTGACAATGGATGACAAGAATGAGACAGAAGATGCGCTGATGGCACCAGAGCCCAGGATCGAGAAGTCGGCGTACGATATGCTGCAGCAAAGCAAGGCTTCAATGGAGGAGATCGTGGGCAAGATGCTTTCTATCAAGAAAGAAGCTCAACCCAAATCTCAACTCCGCGAACTCGTCACTCAAATGTTCCTCCACTTCGTCGTTCTCCGCCAGGCGAATCGATCTATCTTGCTGGAAGAAGACCGTGCGAAAGCTGAAACAGAGCGTGCCAAGACCCCGGTGGACTTCACGACACTTCAGCTTCACAATTTGATGTATGAGAAAAACCACTATGTGAAAGCCATCAAGGCTTGCAAAGATTTCAAGTCCAAGTATCCTGACATTGAACTGGTGCCCGAGGAAGAATTTTTCAGAGATGCACATGAGGATATTAAAGGCACCGTGATGTCAAATGACAGTGCTCACAATCTGATGCTCAAGAGGCTCAATTTTGAGCTCTTCCAGCGTAAGGAACTGTGCAAGCTTCATGAAAAACTGGAACAGAGGAAAAAAGGTCTTTTGGAGACTATTGCAAATCGGAAGAAGTTCTTATCGAGTCTCCCTTCACACCTTAAGTCTCTTAAGAAAGCATCTTTGCCAGTACAGCAGCAATTAGGGGTTTTGCATACAAAGAAACTAAAGCAGCAGCACTCAGCAGAGTTGCTTCCACCTCCTCTCTATGTAATTTACTCACAGTTCACAGCACAAAAAGAAGCATTTGGAGAAAATATAGATATGGAGATAGTAGGAAGTGTGAAGGAAGCTCAAGCTTTTGCCCGTCAGCAAGCAAATAAGGATTCTGGTGTTTCTACCAATGTAGACAATTCCAGGTTAGAGGATGATGCACCTGATGAGGAAGATGATGGGCAGAGAAGGAGAAAGCGGCCAAAGAAGGTACCAAGCAAAGAGAATCTTGACCAGGCAGGAGTATACCAAGTTCATCCACTGAAAATCATCCTTCACATATACGATGATGAGGTCTCTGATCTAAAATCTGCAAAACTCATTACTCTCAAGTTCGAATACTTGTTGAAGTTGAACGTTGTATGTGTTGGGATTGAAGGCTCTCATGAAGGACCCGAGAATAACATCCTGTGCAATCTATTCCCTGATGACACTGGCCTTGACCTTCCTCGTCAGTCAGCTAAGCTTTTTATTGGTAATGCCCGTGCATTTGATGAAAGAAGAACTTCTCGTCCATATAAGTGGGCCCAGCATTTGGCAGGAATTGATTTTTTGCCGGAGGTGTCACCTTTGCTTACTTGCAGTGAAACCCCAAGCAGTGAAACGGCTAAAAATGCTACTGTTGTTTCTGGCCTTTCACTATACCGCCAGCAGAATAGGGTTCAGACAGTTGTGCAAAGGATTCGCTCTCGGAAAAAGGCTCAGCTGGCTCTTGTGGAGCAGCTTGATTCTCTTATGAAGCTTAAATGGCCCACTGTGAGTTGCAAAAGTATTCCCTGGGCCCTGCATACCCCTTTGTGCAATTTCAATGGTTGGTCGTCTGTAGGGTCCTCTCCTAATCAGGCTTCAGCTTTGTCTGTCACCAGTAAGGAGCAAGTTCAGGAGACTTTGGACATCGATATGGATGGGAAGTCCGGTACACCAAGGGAAGAAGTAGAGAGTGCAAGGGAAGATGGGGAACTTCCATCTTTGGTTCCAGTTGCATCTGTTGTAAATGAGGCTAAACTCACTCCCTTGAGAGGATCTGAACTTGAGCATTCCAGACGTCTAGCTTTGATTTCAAAGAGCATTGTGCCTCCAACTAACAAGATAAAATCACTGAGCTTCAAGAAACATGATGATGATTCAGACCTCTTATTAGATTCTGATAGTGATCTCGATGAGCCTGCACAAATTGAGCCAGAGGCAGAAAATATAGCTAGTGATGGATGCTATGTAATGATCGAGAACTCATGGGTGGACTATGGTGTCAGGGAATTTTGCCTTGTTCTAACAAGGAAAATGGATGCAAATGAGAGGAATGTAAAGTTAGAGGCAAAGATCAAAATCAGTATGGAGTATCCTCTTAGGCCTCCCCTTTTTGCAATCAGCCTATACACTGTATCTCCTGTTGAAAGTGATTCTGAAATTGAAGGATCGGAGTGGTACAATGAACTGCGTGCCATGGAAGCAGAGATCAATCTTCACATATTAAGGATGCTGCCTTTGGATCAAGAGAACTATATCTTAGCTCATCAAGTGTGTTGTCTTGCAATGTTGTTTGACTATCACATGGATGAAGCATCTTCTTCTTCTGAAAAAATAAAAAGTACTTCCGTGGTTGATGTTGGTCTATGCAAGCCTGTTACAGGTAGGCTTCTTGCCAGATCAGTTAGAGGGAGGGATCGTAGGAAGATGATCTCCTGGAAAGATATGGAATGCACTCCTGGCTATCCTTACTAG 2451 0.4415 MEVTMDDKNETEDALMAPEPRIEKSAYDMLQQSKASMEEIVGKMLSIKKEAQPKSQLRELVTQMFLHFVVLRQANRSILLEEDRAKAETERAKTPVDFTTLQLHNLMYEKNHYVKAIKACKDFKSKYPDIELVPEEEFFRDAHEDIKGTVMSNDSAHNLMLKRLNFELFQRKELCKLHEKLEQRKKGLLETIANRKKFLSSLPSHLKSLKKASLPVQQQLGVLHTKKLKQQHSAELLPPPLYVIYSQFTAQKEAFGENIDMEIVGSVKEAQAFARQQANKDSGVSTNVDNSRLEDDAPDEEDDGQRRRKRPKKVPSKENLDQAGVYQVHPLKIILHIYDDEVSDLKSAKLITLKFEYLLKLNVVCVGIEGSHEGPENNILCNLFPDDTGLDLPRQSAKLFIGNARAFDERRTSRPYKWAQHLAGIDFLPEVSPLLTCSETPSSETAKNATVVSGLSLYRQQNRVQTVVQRIRSRKKAQLALVEQLDSLMKLKWPTVSCKSIPWALHTPLCNFNGWSSVGSSPNQASALSVTSKEQVQETLDIDMDGKSGTPREEVESAREDGELPSLVPVASVVNEAKLTPLRGSELEHSRRLALISKSIVPPTNKIKSLSFKKHDDDSDLLLDSDSDLDEPAQIEPEAENIASDGCYVMIENSWVDYGVREFCLVLTRKMDANERNVKLEAKIKISMEYPLRPPLFAISLYTVSPVESDSEIEGSEWYNELRAMEAEINLHILRMLPLDQENYILAHQVCCLAMLFDYHMDEASSSSEKIKSTSVVDVGLCKPVTGRLLARSVRGRDRRKMISWKDMECTPGYPY* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0852 816 MobiDBLite consensus disorder prediction 543 561 - -
Vvi18g0852 816 MobiDBLite consensus disorder prediction 301 317 - -
Vvi18g0852 816 MobiDBLite consensus disorder prediction 275 291 - -
Vvi18g0852 816 MobiDBLite consensus disorder prediction 543 562 - -
Vvi18g0852 816 Coils Coil 171 191 - -
Vvi18g0852 816 PANTHER FMS INTERACTING PROTEIN 11 815 IPR019163 -
Vvi18g0852 816 MobiDBLite consensus disorder prediction 275 321 - -
Vvi18g0852 816 Pfam Fms-interacting protein/Thoc5 71 427 IPR019163 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0852 K13174 - vvi:100242063 1556.96