Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0851 ATGGAAACCCAAGCACCCGCTATCACAGCCCTCGGCTCCCTCTTCCGCCTCACTCAAGTTTCTCTTTGGGACGATGCCTCAGCGGAGGTACCAGAAGTATCGTCCTTTTCTCGACGCTCTAAACCATCTGCCGGTGATGAGGAAGACGAGGGCAACTCTGACATTATTTCTGCAGCTAACGATTATAATCCTTCACAAGAGTATGTGGAACTTGCTAAAGAAATGAATGCATTGGGGCTTCCTATTTCCTTCCACACAAACAAGGAGAAGAGGAATGCAGTGGTCAAAGGGAAAAGGAAGAGTAAACAAATGAAGCATCCACACTGTGATAAACAAATTGAGGATGGAGTGCTAGAATTTCCCAAAGTGAGTGAGGGAGATATTGTATCACCTACTGTTTTTCATGATAAAACAAGCAATTCTTTATGTTGCATGTCAATGCTGGGCAAAAGTGAATTCTCTTGCTGTGATATTGCAGTTGATGTCAATAAATCTCAATGCTCCACTGGTGAAGGAGATGATTCAGTGAGCTTGACTGCTGGGACTACTAATGGTGCTACTAAGAAATTCATTTGTGATGGAAATTCTGACATAATGGCCAATGATTGCCCAGGTTGTGATTTTGTAGAGAATGATTCTGTTTCAAAAGATGACATGGAAACTGCAGCAGATAAAATGAATATAAATTCTGAAACTTCTGCTAGTTGTTTGGTAGATGCTGAAATTGATTGTGGCAAGCAAGAAGTAGATGGAAGATTAGTGGAGTTTGAACATTTAGATGGTTCCTTGGTTGCTTGCCATGATGCACAAGGTGAGAAGATTTGTGATGATATCAGCATTGAGCAGCTAGGGGTTCCTAATTTGGTTTTACCATCCCAGTCTTCAGAAGTGATTGACCATGATGGAATTGACAGCTGTGAATCCTATGGGGGTTTTGGAGACTGGAGGGTATATTGGGACTCATTCTACATGAGGAACTACTTTTATAATATCAAAACACATGAGTCCACATGGTTCCAGCCTCCAGGTATGGAATTCTTATTGGGTGACATAACTAATGAGTTTAGTGAAATAATTCCTGAGCAAGATTACATGAAAGCAGTAGACGCATGTGGTTTACAAAATATATTTGTGGTATCCAATCCTGGTGATGAAGTAGCTGGTCAGCCATCGAACGAGCACTCTGTGGGGATTGAGCTTGATGCTGAAAAATCCATGTCCAGCATGACTATGCCTGATGTGAGCAGCTGTTCACTTCAAGAGATTAATAGAAATTGCAATGATAAAATTCCTTCTTGTATTTTATCAGAATCAGATACCCATAAGTGCATTGGCAGTTTGGGGAAAAAGCTTGAGCAACTTGATTATGATGAGGTCTGCAGCAGTGATTTGCAATTTATGCTTACAAATAGGACGGATGAAATGGATTATTCTGAGCCCAAAGATGGAACCAAGATGATTGTTGCTTGTGAAGGGATGTGCAAAAACTTGACTAATGCACCCACTGAAGCAGTTTTTGAGAGCTGGAACTGTAATATGCATCCTGGATATATTGTTTCTGCAATAGATGAGTTGGATATCACACATAATTCTGTTACTACGAAACAAAAAAAGAAAGTGAGAAGGATGCGTCCATGGAAGAAATTATCCAATGAGAATGAAGGGTTTGAATTTCAAGGGCTGCTGGAGGACTCTTCTGCTGATATTAGTAAATATTGGTGGCAGAGGTACCTACTGTTCTCCAAATATGATGATGGTATAAAAATGGATAAAGAAGGATGGTTTTCTGTTACTCCAGAAATTATAGCTAGGCATCATGCATCCCGATGTGGAAGTGGCATCATTGTTGACTGTTTCACTGGAGTTGGTGGGAATGCCATCCAGTTTGCACAGAGGAGCAAACATGTTATTGCCATTGATATTGATCCAAAGAAGATTGAGTATGCACAACATAATGCGGCCATCTATGGAGTGGATGATAGAATAGATTTTATAAAGGGAGACTCTTTTCTTTTAGCATCAACGTTGAAGGCTGATACTGTCTTCTTGTCACCTCCTTGGGGTGGACCTGATTATGCTAAAGTGGAGACATATGACATCAAAACCATGCTTAAGCCACATGATGGATTTTTTCTCTTCAACACAGTAAAGAAAGTTGCTTCCAGAGTTGTCATGTTCCTCCCAAGAAACGTTGATGTCAATCAACTGGCAGAGTTGTCCCTATCTGCTGATCCTCCGTGGTTCCTAGAGGTGGAGAAGAACTTCTTAAATGGTAAGTTGAAGGCAGTAACAGCTTACTTCAGTGACACCTCAATACAAAAGAACATCTCATCATTTCAGTGA 2343 0.4067 METQAPAITALGSLFRLTQVSLWDDASAEVPEVSSFSRRSKPSAGDEEDEGNSDIISAANDYNPSQEYVELAKEMNALGLPISFHTNKEKRNAVVKGKRKSKQMKHPHCDKQIEDGVLEFPKVSEGDIVSPTVFHDKTSNSLCCMSMLGKSEFSCCDIAVDVNKSQCSTGEGDDSVSLTAGTTNGATKKFICDGNSDIMANDCPGCDFVENDSVSKDDMETAADKMNINSETSASCLVDAEIDCGKQEVDGRLVEFEHLDGSLVACHDAQGEKICDDISIEQLGVPNLVLPSQSSEVIDHDGIDSCESYGGFGDWRVYWDSFYMRNYFYNIKTHESTWFQPPGMEFLLGDITNEFSEIIPEQDYMKAVDACGLQNIFVVSNPGDEVAGQPSNEHSVGIELDAEKSMSSMTMPDVSSCSLQEINRNCNDKIPSCILSESDTHKCIGSLGKKLEQLDYDEVCSSDLQFMLTNRTDEMDYSEPKDGTKMIVACEGMCKNLTNAPTEAVFESWNCNMHPGYIVSAIDELDITHNSVTTKQKKKVRRMRPWKKLSNENEGFEFQGLLEDSSADISKYWWQRYLLFSKYDDGIKMDKEGWFSVTPEIIARHHASRCGSGIIVDCFTGVGGNAIQFAQRSKHVIAIDIDPKKIEYAQHNAAIYGVDDRIDFIKGDSFLLASTLKADTVFLSPPWGGPDYAKVETYDIKTMLKPHDGFFLFNTVKKVASRVVMFLPRNVDVNQLAELSLSADPPWFLEVEKNFLNGKLKAVTAYFSDTSIQKNISSFQ* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0851 780 ProSitePatterns WW/rsp5/WWP domain signature. 315 341 IPR001202 GO:0005515
Vvi18g0851 780 Gene3D Vaccinia Virus protein VP39 563 776 IPR029063 -
Vvi18g0851 780 ProSiteProfiles WW/rsp5/WWP domain profile. 315 343 IPR001202 GO:0005515
Vvi18g0851 780 Pfam RNA cap guanine-N2 methyltransferase 614 768 IPR019012 GO:0001510|GO:0008168|GO:0009452
Vvi18g0851 780 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 564 771 - -
Vvi18g0851 780 CDD AdoMet_MTases 615 713 - -
Vvi18g0851 780 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 569 697 IPR029063 -
Vvi18g0851 780 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 61 774 - -
Vvi18g0851 780 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0851 Vvi-Chr18 8745230 8754990 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0851 K14292 - vvi:100262697 1599.33