Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0850 ATGCGTCGAATCCAGTTGGTTCGTCGATTTCGTAGAGTTGAAATCTTTGATTTGATGCAGCATTTGGCAGGACACGATCTGCAAGAGACCTCAAGTGGTCCAGATCTGATTCCAAACAAAGCTACAGTACACAAGCACAGTCGTCTCATTAGGAAGGAAGAAAAAGCAAAAGTTCTAAAGGAAGACAAGCAAGTAGAAGCAGAAGAGGAGAATCTGGTCCTAGATTCTGCAAGAAATTCCTTCTCTTTAGCTCTCAAAGAGTGTCAGGACCGGAGATCTAGATCTGAAGCTCTTTCAAAGAAACATGACCGGCGAAGACCTGCTTCACTGGATCTGAATAATGCTACTAGCTCTTCCCCGCGGTTGGGAGGCATGAAGAAGAGCTCTGCTTCCTCTCGCAGGTCTGGCACATTTCCAAGCCCTGGCACGCCGAATTATCGGCACAGTAATTTTGGGATCCAGAAGGGTTGGAGTTCAGAGCGAGTACCATCGCACACGAATGTGAACAGGAGGCATGTCAGTGCTGCATTGTTGCCTTTCAACAACGGAAGGACGTTGCCATCGAAATGGGAAGACGCAGAGAGGTGGATTTTTAGTCCAGTGGCTGGAGATGGTGTTGTCAAGCCATCTTTTCCACCACCTCAAAGGCGCCCCAAGTCAAAAAGTGGTCCACTTGGACCTCCTGGGATTGCATACTATTCATTGTATTCGCCAGCCATACCAATGTTTGAAGGAGGAAATGCTGGAAATTTCATGGCAGGTTCGCCATTTTCAGCTGGAGTAATAGCTCCAGATGGTTTGGCTATTCATTGTGGTGGTCGGGGTGGAGTGATGCCTGTGAGAACAGAGCCTTGCATGGGCCGCTCAGCCAGTGTACATGGGTGCTCTGAACTTCTGAACCAGTCATCCTTACGTGACTCCCGAGATGAGAAATTTGATGGGGTCAAAGATGCAGCCACTGATATTTCTCGTACTGTTTCAAGACGGGACATTGCAACCCAGATGAGCCCTGAGGGTAGCATCTTCTCATCTCCTGAAAGGAAACCATCTTTTTCTCCTTCCTCTCCTACTGTCTTGCCCATTGTGGAGTTGCAGAGTGTCAATTCCTCTAAATTGGAAATCAGGGATGTTCAAGTTGATGAACGGGTCACAATGACAAGGTGGTCCAAGAAACATAGAGGCAGAATTCCTGGGAAGGGCTCAGAAAATGTTGATGGCTGGAAAAAGAAAGCCGTGGAGGCACACTCTTCAGCTTGGGAAGTTTCAGAGACAGCAAAGAGCATTTCAAAGGTTAAAAGAGAGGAAGCCAAAATCACTGCTTGGGAGAACCTGCAGAAGGCAAAAGCTGAGGCAGCAATTCGGAAACTAGAGATGAAACTGGAAAAGAAAAGATCATCATCCATGGATAAGATAATGAACAAGCTAAGATCTGCTCAGAGGAAAGCTCAAGAAATGAGGAGCTCAGTGTTAGCCAACCATGCCCATCAAGTTTCTGGGAATGCTCACAAGGCTGTATCCTTCTGCAAGACTCGTCAGATGAGTTCCTTGAGTGGTTGTTTTACTTGCCATGCTTTCTAA 1578 0.4689 MRRIQLVRRFRRVEIFDLMQHLAGHDLQETSSGPDLIPNKATVHKHSRLIRKEEKAKVLKEDKQVEAEEENLVLDSARNSFSLALKECQDRRSRSEALSKKHDRRRPASLDLNNATSSSPRLGGMKKSSASSRRSGTFPSPGTPNYRHSNFGIQKGWSSERVPSHTNVNRRHVSAALLPFNNGRTLPSKWEDAERWIFSPVAGDGVVKPSFPPPQRRPKSKSGPLGPPGIAYYSLYSPAIPMFEGGNAGNFMAGSPFSAGVIAPDGLAIHCGGRGGVMPVRTEPCMGRSASVHGCSELLNQSSLRDSRDEKFDGVKDAATDISRTVSRRDIATQMSPEGSIFSSPERKPSFSPSSPTVLPIVELQSVNSSKLEIRDVQVDERVTMTRWSKKHRGRIPGKGSENVDGWKKKAVEAHSSAWEVSETAKSISKVKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLRSAQRKAQEMRSSVLANHAHQVSGNAHKAVSFCKTRQMSSLSGCFTCHAF* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0850 525 MobiDBLite consensus disorder prediction 335 355 - -
Vvi18g0850 525 MobiDBLite consensus disorder prediction 92 152 - -
Vvi18g0850 525 MobiDBLite consensus disorder prediction 92 109 - -
Vvi18g0850 525 Coils Coil 446 466 - -
Vvi18g0850 525 Coils Coil 49 71 - -
Vvi18g0850 525 Coils Coil 468 488 - -
Vvi18g0850 525 Pfam Remorin, C-terminal region 412 514 IPR005516 -
Vvi18g0850 525 MobiDBLite consensus disorder prediction 110 152 - -
Vvi18g0850 525 PANTHER OS02G0116800 PROTEIN 135 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0850 Vvi-Chr18 8738657 8742254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0850 - - vvi:100257562 1003.43