Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0849 ATGGCTTCCGAGGATGATCTCTGTAGAGATTATCTGCTGTTGAAACCAGAAGAAGCTAGCTTCTTGGATCTGGTTCGCGTTCTGTGTTGTTCTGAATGGGAGAAAAGAGGATTTATAGAGTGTACGGAAGAGAAGGAGCTGATGAGAGAGCGCCGATGGATCATATTCATCTCCCTCCTTGTGCAGAAAATGCTCCTTTACCTGAGAAAGCCTATGGCTATCACTGGGTCTGTAGTGGAGCTGTGGCTGAATCTTCTCTCAAGCAATGGCGGCTTTCTGGCCCTCCTGTTAAATCTCTTGAAAGGGAAGATGGCGCTGCCAGATAAATCGTCAGCAGAATTCACATCAGTGTTGGGAAATCTTGACACTAGAGTGGACTTAGACAGGAGCATAAAAAACGATGACCGCAGATATAGCCTCTCATTGTCTATAATGGCTGCTAAATTATCATACGAGAATGAAGATTTCGTCCAATCTGTTGTCAGAGATCACTGGAAGATGGAATTCTTGACGTTTTACAATTTCTGGAACGAATATCAAAAGAAATTCTCAACGCAAGCCTTCATGTTCCGTGATACAAGTAGTGATCCTGCCCTCATCGTAGTGGCGTTCAGAGGCACCGAGCCATTTGACGCGGATGCGTGGAGGACAGATTTTGACATCTCATGGTACAAGCTACCCAATGTGGGTAAGATCCATGGTGGATTCATGAAAGCTCTCGGCCAGCAAAAGCGCATAGGGTGGCCTAAGGAGATTGAACAAGGCAATGACAGTTCATTATTGGCTTACTATACCATTAGACAACAGCTGAGAGAGATTCTGCACAAGGATGAAAAAGCAAAGTTTATAGTGACGGGACACAGCTTGGGCGGGGCACTAGTAATCCTGTTTGTGGCTATTCTAGCGTATCATGAGGAGTCCTGGTTGATGGAGAAGTTGGAAGGGGTCTACACTTTTGGGCAGCCAAGGGTGGGGGATGAGCAGTTTGGGAAGTTCATGGAGGAGAAGTTTAGAACGCATAATGTGAGATATTTGAGATGCGTTTACTGCAACGATATGGTGGTTAGGTTGCCTTATGATGACAGAATCCTCTTGTTTAAGCACTTTGGGACCTGCCTCTACTTCAATAGCTGCTACAGTGGGGAGGTGGTACGGGAGGAACCAAACAAGAATTACTTCTCCGTGGTGTGGGCCATTCCCAAGATCTTAAATGCAGTTTGGGAGCTGATTAGAAGTTTTATCATCCCATACATCAAGGGTCCGGACTACAGAGAAGGGTGGTTTCAGAGATTGTTAAGGGTAGTTGGGTTGGTAATTCCTGGATTGTCAGATCATGGCCCTCAAGATTATGTAAATGCCACCAGATTGGGATCCTTGCCTTTAACTCCACAACTCTAA 1398 0.4549 MASEDDLCRDYLLLKPEEASFLDLVRVLCCSEWEKRGFIECTEEKELMRERRWIIFISLLVQKMLLYLRKPMAITGSVVELWLNLLSSNGGFLALLLNLLKGKMALPDKSSAEFTSVLGNLDTRVDLDRSIKNDDRRYSLSLSIMAAKLSYENEDFVQSVVRDHWKMEFLTFYNFWNEYQKKFSTQAFMFRDTSSDPALIVVAFRGTEPFDADAWRTDFDISWYKLPNVGKIHGGFMKALGQQKRIGWPKEIEQGNDSSLLAYYTIRQQLREILHKDEKAKFIVTGHSLGGALVILFVAILAYHEESWLMEKLEGVYTFGQPRVGDEQFGKFMEEKFRTHNVRYLRCVYCNDMVVRLPYDDRILLFKHFGTCLYFNSCYSGEVVREEPNKNYFSVVWAIPKILNAVWELIRSFIIPYIKGPDYREGWFQRLLRVVGLVIPGLSDHGPQDYVNATRLGSLPLTPQL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0849 465 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 458 IPR044819 GO:0004806|GO:0006629
Vvi18g0849 465 CDD Lipase_3 136 382 - -
Vvi18g0849 465 Gene3D alpha/beta hydrolase 128 399 IPR029058 -
Vvi18g0849 465 SUPERFAMILY alpha/beta-Hydrolases 142 393 IPR029058 -
Vvi18g0849 465 Pfam Lipase (class 3) 201 361 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0849 Vvi-Chr18 8731523 8735197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0849 9 465 Acyl Lipid Metabolism Gene Families AT1G56630 53.684 2.22e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0849 - - vvi:100252216 915.605