Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0837 ATGATCAAGGAAGGGGATTATAAGCTGGTGAGGACGGGATTCAGTGCATCCTTTGCCACCCACCTTCATTCTTTCCTTCAGAGTAACGGGATTAATATTATAGTTGGTGTTCAAACTCCAAATTGCATTAGACAGATGGTTTTTGGTGCAGTAGCACTGGATTATCAATCTGTTACTGTAATTGTTGATGCCAAAGACTGCTTTCCAACCACTATGCCGTCACTATCGGCACTGATCTTGCAAACCAGTGGCTGTCAAGGGATCCTTCTATCCCCACCAACAGTGCCTTGGATGTCCCGTCCGCTGAATTATGATGTGTGCTGCACTTTTCCATTTCTGGATATGCTAGTGGAATATAGGAAGTATGGTGGGATGGATTCAAACACTACTCGGGCAGCAGAGAACACCCCAGCAGCTATTGAAGAACGCGGAACAGAGTGGCTTGAGGAATGGCCAAAGAGATAA 465 0.4559 MIKEGDYKLVRTGFSASFATHLHSFLQSNGINIIVGVQTPNCIRQMVFGAVALDYQSVTVIVDAKDCFPTTMPSLSALILQTSGCQGILLSPPTVPWMSRPLNYDVCCTFPFLDMLVEYRKYGGMDSNTTRAAENTPAAIEERGTEWLEEWPKR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0837 154 Gene3D - 1 88 IPR036380 -
Vvi18g0837 154 PANTHER OS02G0276400 PROTEIN 1 152 - -
Vvi18g0837 154 Pfam Isochorismatase family 4 64 IPR000868 -
Vvi18g0837 154 SUPERFAMILY Isochorismatase-like hydrolases 4 72 IPR036380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0837 Vvi-Chr18 8617092 8617556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0837 - - vvi:100242883 110.538