Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0820 ATGGGTTCAAAGGATGACGAGCTTCATGTAATGTTCCTTCCCTACATGGCACCAGGCCACATGATGCCACTGGTAGACATGGCTAGGCTATTTGCGGCTCATGGTGTTAGGATTACTATAATCACCACTACCATGAATGCTTTTCGCTTTCAGAACGCCATTCATAGAGATATTGAAGCCGGTCGCCAAATTGGGTTAGAGATTCTCCAATTCCCTTCCGTAGAAGCTGGGCTTCCTGAGGGCTGCGAGAATTTAATCTCAACCCCTACCCCAGAAATGTCCATGAAACTCTTCCAAGCCATCCGAATGATGAAACCGCGGATGGAAACACTCTTACGCAACCACCGTCCCGATTGCATTGCTTCCGACGTTCTGTTCCACTGGACCGTGGATGTGGCCGCTGAGCTCGGGATTCCCCGCCTCTCGTTTAGCGGCAGCGGATACTTCAACCTCTGCGTCTCCCACTGCGTTGAACGTTACCAACCTCACAAGGATGTATCATCGGAGACTGAAATTTTCCTTGTCCCAGGGCTGCCAGATGAAATCAAGCTCACGAGGTCACAGTTACCGGACCTTGTCAAAGGTAGAAACGAGTTTTCTGAGTTGTTCGATAGACTCAAAGAGGCTGAGAGGAAGAGCTTTGGGACATTGATGAACAGCTTCTACGAGTTGGAGCCAGCTTATGCTGACTACTACAGAAACAACATTGGAATCAAGGCGTGGCACATAGGGCCAGTCTCACTGTTCAACAAAGACGCAGCTGATAAGGCTGAACGAGGAAACAAAGCTTCTCTTGATGAAGATAGCTGGTTGAGTTGGCTTGATTCTAAGAAACCCAACTCGGTTCTCTACGTCTGCTTGGGAAGCCTAACCCGATTAAGCAAGACTCAGCTGACAGAGATTGCCAGTGCACTTGAAGATTCAGGTCACGCATTCATCTGGGTGGTCGGGAAAGTCCTCAATTCATCGGGCGAGGAGGATGGGAGCCATGAATGGTGGCTACCCGAAGGGTTCCAAGAGAGAGCCTACCAAAGTGGCATAGGACATATAATAAGAGGATGGGCTCCACAGGTGTTGATTCTTGAGCATCCAGCCATTGGAGGGTTCTTGACTCACTGTGGCTGGAACTCCATCCTTGAAGGTGTGAGCTCAGGCCTACCAATGATCACGTGGCCAATCTTTGCCGAGCAATTTTACAACGAGAAACTGGTGACGCAAGTGTTGAAATTAGGAGTTGGGGTCGGTAACGAGGTCTGGAAGGTGTGGGCAACAGAGGAGATGCCATTAATGAGCAGAGAAAAGATCAGGCGAGCAGTGACCATGGTGATGGACCAAGGCATTGCAGCAGACGAGATGAGGAGGAAAGCTAGTCTACTTGGTGAGCTGGCAAAGAAGGCTATTGAAAAGGGAGGGTCGTCCTACAACCAGTTGAAGGCTCTTATAAAGGAGATTAGATCGTTCAGACAGCCCCCCCTATGCAGAAACTTGTAA 1491 0.4943 MGSKDDELHVMFLPYMAPGHMMPLVDMARLFAAHGVRITIITTTMNAFRFQNAIHRDIEAGRQIGLEILQFPSVEAGLPEGCENLISTPTPEMSMKLFQAIRMMKPRMETLLRNHRPDCIASDVLFHWTVDVAAELGIPRLSFSGSGYFNLCVSHCVERYQPHKDVSSETEIFLVPGLPDEIKLTRSQLPDLVKGRNEFSELFDRLKEAERKSFGTLMNSFYELEPAYADYYRNNIGIKAWHIGPVSLFNKDAADKAERGNKASLDEDSWLSWLDSKKPNSVLYVCLGSLTRLSKTQLTEIASALEDSGHAFIWVVGKVLNSSGEEDGSHEWWLPEGFQERAYQSGIGHIIRGWAPQVLILEHPAIGGFLTHCGWNSILEGVSSGLPMITWPIFAEQFYNEKLVTQVLKLGVGVGNEVWKVWATEEMPLMSREKIRRAVTMVMDQGIAADEMRRKASLLGELAKKAIEKGGSSYNQLKALIKEIRSFRQPPLCRNL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0820 496 Gene3D Glycogen Phosphorylase B; 2 271 - -
Vvi18g0820 496 CDD GT1_Gtf-like 8 473 IPR002213 GO:0008194
Vvi18g0820 496 Coils Coil 192 212 - -
Vvi18g0820 496 Gene3D Glycogen Phosphorylase B; 272 468 - -
Vvi18g0820 496 FunFam Glycosyltransferase 6 269 - -
Vvi18g0820 496 ProSitePatterns UDP-glycosyltransferases signature. 354 397 IPR035595 -
Vvi18g0820 496 FunFam Glycosyltransferase 270 468 - -
Vvi18g0820 496 PANTHER GLYCOSYLTRANSFERASE 8 480 - -
Vvi18g0820 496 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 487 - -
Vvi18g0820 496 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 277 406 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0820 Vvi-Chr18 8470824 8472314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0820 6 484 Glycosyltransferase AT2G15490 47.368 1.39e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0820 - - vvi:100243791 1009.21