Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0809 ATGTCAATCTCTGGAATTCAAGGTCATTCGCTTGAGGTCACTGTTGTAGGATGTAGTAATTTGAGGGACACAGAATGGATATCAAGGCAAGATCCCTATGTCTGTCTTGAATATGGAAATTTCAGGCACCAAACCAAAACGTGTACAGATGGAGGTAAGAACCCATCTTTCCAGGAAAAGTTCATCTGCACACTCATCGAAGGCCTTCGAGAACTGAATGTTGTTGTCTGGAATAGCAACACCCTCACGGCGGATGACTTCATTGGCAGCGGAAAGATTCAACTCCACAAGGTCCTTTCCCAAGGTTATGATGATACTGCGTGGCCAATTCAGGGTAAATATGGAAGGTACTCGGGAGAAGTTCGGTTCATACTGTATTATCCAAATGCTAATAACAAAACAGCCACAAGACTTGCACCATCAGTGCCATCATATGCAACACCCAATTCAGCCCTTTCTCCGATTTACTCGTATGATACTGCCCCCCCACCACTGCCAGTGGCTCCTTACCCGGCAGCCACCACCGCCTACTCTGCACCTCCTTACCCTCCTGCCACCAGTTACTCTGCACCATCTCCTTACACAACCTATTCACCATCATCCTCTTACCCTCCTTCTCAACCTCTAGCTGGCTATCCCCAGACATGTCCTCCCTCTGGATATCCTTCACAAACATTCCCACCTCCCCCTCAACCTTTAACATCACAACCATACCCGCCTCCTCCTCAACCCCTAAATTCACAACCATACCCACCGCCTCCTCAGCCCCCAGCATCACACCCATACCCGTCTCCTCCTCAGGCACCAGCATCACAGGCATACCCACCTCCCCCTCAGGCCCCTGCCTATTATCCTTCAGCTCAATATCCCGCAGTCTATCCACCACCACCATACTAA 897 0.4961 MSISGIQGHSLEVTVVGCSNLRDTEWISRQDPYVCLEYGNFRHQTKTCTDGGKNPSFQEKFICTLIEGLRELNVVVWNSNTLTADDFIGSGKIQLHKVLSQGYDDTAWPIQGKYGRYSGEVRFILYYPNANNKTATRLAPSVPSYATPNSALSPIYSYDTAPPPLPVAPYPAATTAYSAPPYPPATSYSAPSPYTTYSPSSSYPPSQPLAGYPQTCPPSGYPSQTFPPPPQPLTSQPYPPPPQPLNSQPYPPPPQPPASHPYPSPPQAPASQAYPPPPQAPAYYPSAQYPAVYPPPPY* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0809 298 CDD C2 11 108 - -
Vvi18g0809 298 SMART C2_3c 10 107 IPR000008 -
Vvi18g0809 298 MobiDBLite consensus disorder prediction 191 298 - -
Vvi18g0809 298 MobiDBLite consensus disorder prediction 220 298 - -
Vvi18g0809 298 MobiDBLite consensus disorder prediction 191 209 - -
Vvi18g0809 298 Pfam C2 domain 10 101 IPR000008 -
Vvi18g0809 298 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Vvi18g0809 298 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 128 IPR035892 -
Vvi18g0809 298 Gene3D C2 domain 9 129 IPR035892 -
Vvi18g0809 298 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 4 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0809 Vvi-Chr18 8350811 8352434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0809 - - vvi:100252428 358.221