Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0808 ATGGACTTTCTAGGGATAGATTTTAGCTGTGCCTTTGGATCGCTGCGGAGCGGCCAGATTCCGCATAAGGACTGCCTGCTTCCCATTATCTCCAAGCTCCTTGGTTATTGCATCGTCGCCGCTTCCACCACCGTCAAAGTCCCTCAGATATTAAAAATTTTGAAACATAAAAGCATCAGAGGGCTTAGTACTGTAGCCTTTGAGCTGGAAGTTGTTGGCTATACCATTGCTCTGGCTTACTGTCTCCACAAAGAGCTTCCATTTTCAGCTTATGGGGAGTTGCTATTTCTTTTAATCCAAGCTATAATATTAGTCGCTATAATCTACTATTATTCTCAGCCTGTGGGAATCAAAACATGGATCAGGGCATTACTTTATTGTGCTGTGGCACCTACTGTTTTAGCTGGTCAAGTTGATCCAGTCCTGTTCGAAGCTCTTTATGCATCTCAGCATGCGATTTTTTTCTTTGCCAGGGTCCCACAGATATGGGCAAATTTTAGGAACAAAAGCACAGGGGAACTCAGCTTCTTAACATGTTTGATGAATTTTGGAGGTTCCATGGTGAGAGTCTTTACAAGCATCCAAGAAAAAGCTCCAACAAGCGTTCTTATGGGCTCTGTGATTGGTGTTGTGACAAACGGAAGCATCCTGAGTCAAATAATTATATACCAGAAGCCACAGGTGAAGAAGGGGAAGAAAGTAGAATAG 708 0.4308 MDFLGIDFSCAFGSLRSGQIPHKDCLLPIISKLLGYCIVAASTTVKVPQILKILKHKSIRGLSTVAFELEVVGYTIALAYCLHKELPFSAYGELLFLLIQAIILVAIIYYYSQPVGIKTWIRALLYCAVAPTVLAGQVDPVLFEALYASQHAIFFFARVPQIWANFRNKSTGELSFLTCLMNFGGSMVRVFTSIQEKAPTSVLMGSVIGVVTNGSILSQIIIYQKPQVKKGKKVE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0808 235 Gene3D - 150 233 - -
Vvi18g0808 235 Pfam PQ loop repeat 30 89 IPR006603 -
Vvi18g0808 235 Pfam PQ loop repeat 151 200 IPR006603 -
Vvi18g0808 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 6 233 IPR016817 -
Vvi18g0808 235 SMART ctns 44 75 IPR006603 -
Vvi18g0808 235 SMART ctns 156 187 IPR006603 -
Vvi18g0808 235 Gene3D - 27 113 - -
Vvi18g0808 235 PIRSF Mpdu1 7 235 IPR016817 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0808 1 223 Miscellaneous Gene Families AT4G07390 78.475 1.24e-132 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0808 K09660 - vvi:100264234 452.981