Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0805 ATGTCTGCTCCTCTGCTTCTCAGAGCCGTTCCTCTCCTCCGTCTCCGACATCACAGACTTGCCGCCCCCCTCTTCACGCTTGCGCAGCGTCCTTGGTGCTCTTCCACCGAGTCGAGTCGGTCGGACGTGAATGTATCCTATGCGGACAAGAACACCACAGTCTTGAGTTCCAGGGATCCAGCTAACTACCCCAGATGGGATGATCCTGATTTCCGGAAGTGGAAAAATAGAGAAGAAGAGATCCTCAGAGACATTGAACCCATCACTTCGCTCACCAAAGAGATTCTCCACTCGGACAGGTACATGGATGGGGAACGTCTAACCGCTGAAGATGAGAAAGCTGTGGTGGAGAAGCTTCTCATTTACCATCCACATTCGGAAGATAAAATTGGATGTGGACTGGATTGCATTATGGTTGACCGACATCCTCAGTTTCGACACTCAAGGTGCCTGTTTGTTGTAAGGACTGACGGTGGATGGATAGATTTCTCTTATCAGAAATGCCTTCGAGCATATATTCGTGATAAGTACCCATCTCATGCAGACCGATTCATTCGTGTGCATTTCAAACGCAGTAGTGGTTAA 585 0.4889 MSAPLLLRAVPLLRLRHHRLAAPLFTLAQRPWCSSTESSRSDVNVSYADKNTTVLSSRDPANYPRWDDPDFRKWKNREEEILRDIEPITSLTKEILHSDRYMDGERLTAEDEKAVVEKLLIYHPHSEDKIGCGLDCIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPSHADRFIRVHFKRSSG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0805 194 FunFam Protein DCL, chloroplastic 83 175 - -
Vvi18g0805 194 Gene3D - 79 175 - -
Vvi18g0805 194 PANTHER PROTEIN EMBRYO DEFECTIVE 514 53 192 IPR044673 -
Vvi18g0805 194 Pfam Protein of unknown function (DUF3223) 93 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0805 Vvi-Chr18 8301528 8324703 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0805 - - vvi:100247085 381.719