Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0803 ATGGGTGGCTGGGCAATTGCGGTCCATGGAGGTGCTGGTGTTGACCCAAATCTCCCACCCCAGCGTCAAGAGGAAGCAAAACAACTCCTCACTCGCTGTCTCAATCTCGGCATCTCTGCTCTTCGCTCCTCTCTTCCTGCCATAGATGTCGTCGAACTAGTTGTGCGAGAACTGGAGAGTGACCCCCTGTTTAACTCAGGGCGTGGGTCAGCCCTGACTGAAAATGGAACGGTGGAGATGGAAGCCAGCATCATGGACGGCCCCAAAAGGAGATGCGGAGCCGTATCGGGTCTGACTACGGTGAAGAACCCCATATCACTGGCCCGCCTTGTCATGGACAAGTCTCCCCATTCCTACATGGCTTTCGCTGGCGCTGAGGAATTTGCCCGGCGACAGGGTGTGGCGCTGGTGGATAACCAATACTTTATCACGGAGGAAAACGTGGGGATGTTGAAATTAGCGAAAGAAGCCAACAGCATCCTGTTCGATTACAGGATCCCAACCGTTGGATTGGAGACATGCAGCGCGGGTGCAGCATCTGTGGAAGCCGCGTTGCAGATGAATGGTCTTCCTATCAGCGTCTATGCGCCAGAAACGGTGGGGTGCGTTGTAGTGGACGGACAAGGGCGATGCGCTGCGGGAACTTCCACCGGTGGCCTCATGAATAAAATGAGCGGTCGGATCGGTGACTCGCCTTTGATCGGGGCGGGGACCTACGCCGGTGAACTTTGTGGTGTGTCTTGCACTGGAGAAGGAGAGGCCATTATTCGCGGAACCCTGTCTCGTGATGTGGCGGCTGTGATGGAATACAAGGGCTTAGGCCTCCAAGAGGCTGTGGACTTTGTCATCAAAGAGAGGCTTGATGAAGGGATGGCTGGAATGATTGCGGTTTCAAGAAATGGTGAGGTTGCCTACGGGTTTAACACCACTGGAATGTTTAGGGGCTGTGCCACTGAAGATGGGTTCATGGAAGTTGGTATCTGGGAATAA 990 0.5444 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLNLGISALRSSLPAIDVVELVVRELESDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYMAFAGAEEFARRQGVALVDNQYFITEENVGMLKLAKEANSILFDYRIPTVGLETCSAGAASVEAALQMNGLPISVYAPETVGCVVVDGQGRCAAGTSTGGLMNKMSGRIGDSPLIGAGTYAGELCGVSCTGEGEAIIRGTLSRDVAAVMEYKGLGLQEAVDFVIKERLDEGMAGMIAVSRNGEVAYGFNTTGMFRGCATEDGFMEVGIWE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0803 329 Pfam Asparaginase 4 328 IPR000246 GO:0016787
Vvi18g0803 329 PANTHER L-ASPARAGINASE 4 315 IPR000246 GO:0016787
Vvi18g0803 329 Gene3D (Glycosyl)asparaginase 199 329 - -
Vvi18g0803 329 FunFam Isoaspartyl peptidase/L-asparaginase 199 329 - -
Vvi18g0803 329 CDD Asparaginase_2 5 321 - -
Vvi18g0803 329 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 326 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0803 Vvi-Chr18 8278230 8279603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0803 6 289 Miscellaneous Gene Families AT4G00590 27.778 9.71e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0803 K13051 - vvi:100248834 652.514