Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0800 ATGGCCGGTAGAGGAGGTGTTCGCCATGGCAAGTGGGATGGGAACGTGCCACCAGAGTGCAGACCTAACCCATCCATCCTCCGACTCAATCCTCAACTCCAATGGGAAGAGGCACACGAGCCGCTTCACACAGGCATCGGCCCTCCAAAGACTCAAGGGGTGGGACCCGGCTTGGCGTTTGCCAATGAGATCCGAGCCAAAGGTTCCATGGTTGGGGTTGTGGGACTGGTGCCTTGTGCGGTTGGGGGAACTAAAATAAGTGCATGGGCGCGTGGGACGACGCTGTACAATGAATTGGTGAGACGAACGAAGGCCTCCGTGAGTGGAGGAGGACAGCTCCGAGCCATTCTGTGGTATCAAGGAGAGAGTGATACAGTGAGATCTGAAGATGCAGAGGCGTACAAGGGCAACTTGGAAAAGCTTATCATAGACTTGCGCTCTGATCTTAGTCACCCCACTCTCCTCTTCATCCAGGTGGCACTTGGATCGGGGGAAGGCAAATTTATAGAGACAGTGAGGAGAGGTCAGCTGGGAATCAGGTTACCAAATGTGAAGTGCGTAGACGCCAAGGGACTGAGGCTTGAACCAGATAAACTTCACCTCACTACAATTGCTCAGATCCACCTCGCTCAGAAGTTGGCTGCTGCCTTTCTTTCTGGTGATCAATCATGA 672 0.5342 MAGRGGVRHGKWDGNVPPECRPNPSILRLNPQLQWEEAHEPLHTGIGPPKTQGVGPGLAFANEIRAKGSMVGVVGLVPCAVGGTKISAWARGTTLYNELVRRTKASVSGGGQLRAILWYQGESDTVRSEDAEAYKGNLEKLIIDLRSDLSHPTLLFIQVALGSGEGKFIETVRRGQLGIRLPNVKCVDAKGLRLEPDKLHLTTIAQIHLAQKLAAAFLSGDQS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0800 223 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 1 219 - -
Vvi18g0800 223 Gene3D SGNH hydrolase 1 219 IPR036514 -
Vvi18g0800 223 MobiDBLite consensus disorder prediction 1 24 - -
Vvi18g0800 223 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 1 218 IPR005181 -
Vvi18g0800 223 SUPERFAMILY SGNH hydrolase 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0800 Vvi-Chr18 8266901 8269423 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0800 - - vvi:100253920 452.981