Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0795 ATGTTCTCTATGTTCGAGCTCAGGTTGAGATGGCACTGGGAAGTTGCGGCAGCAGAGAAGACGGGGTTGATTGATTATAGTAATGTTGAAGTTGCAAAATTGCTGAACAATGTTAAACTGGTGGCAAGAGCGCAGGCCCATGGCAATGAACTCTTTAGTTCTGGAAGATTTTCAGAAGCCTGCTTAGCTTACGGGGAAGGCCTCAAGTATGATACATCGAACTCTGTTCTATATTGCAATAGAGTAGTTTGCTGGTCTAAACTTGGTTTATGGGAAAAATCTATTGAGGAATGCAACCATGCCCTCAAGATCCAACCAAATTACACCAAGGCTCTTCTTCATAGAGCTGTCTCAAATGGGAAGCTTGGACGATGGGCAGATGTAGTAAAAGATTATGAGGTCTTGAGAAGGGAACTTCCTGGAGACGTCGAGGTTGTTGAATCTCTATCACAGGCACAAGCTGCATTGTCAAAATCATGGGAGGATGAAACTCATAGTGTGAAGTTTGGTGGTGAAGTGGAGGAGGTTTCTGGTGTCGACCAGTTTAAAACTGCAATATCTTCACCTGGTGTTTCGGTGGTTCACTTCAAAGTGGCATCCAATTACCAGTGTGAACAGGTCTCCCCCATCATGGATAAGCTCTGTGTTCAATACCAATCCATAAAATTTCTCAAGATGGATGTGGAGGAGAGCCCAACAGTAGCAAAAACTGAGAGCATAAAAAGTGTTCCAACCTTCAAGATTTACAAGAACGGGGATAAGGTCAATGAGATGATTTGTTCCGACCTTCAAAATTTATTTTAA 804 0.4279 MFSMFELRLRWHWEVAAAEKTGLIDYSNVEVAKLLNNVKLVARAQAHGNELFSSGRFSEACLAYGEGLKYDTSNSVLYCNRVVCWSKLGLWEKSIEECNHALKIQPNYTKALLHRAVSNGKLGRWADVVKDYEVLRRELPGDVEVVESLSQAQAALSKSWEDETHSVKFGGEVEEVSGVDQFKTAISSPGVSVVHFKVASNYQCEQVSPIMDKLCVQYQSIKFLKMDVEESPTVAKTESIKSVPTFKIYKNGDKVNEMICSDLQNLF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0795 267 Gene3D Tetratricopeptide repeat domain 14 159 IPR011990 GO:0005515
Vvi18g0795 267 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 15 265 IPR044534 -
Vvi18g0795 267 SUPERFAMILY Thioredoxin-like 87 260 IPR036249 -
Vvi18g0795 267 Gene3D Glutaredoxin 160 266 - -
Vvi18g0795 267 FunFam TPR repeat-containing thioredoxin TTL4 167 266 - -
Vvi18g0795 267 Pfam Thioredoxin 180 258 IPR013766 -
Vvi18g0795 267 CDD TRX_family 180 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0795 Vvi-Chr18 8220838 8221641 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0795 - - vvi:100247135 451.055