Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0787 ATGGATGCGCCAGTTCTTTTGCTTCTTCTCGCTCTGCTTCTATCTTCTCCACTTCCATCGTCTACCCTCGACAGTTTGAGTCAAGGCTCATCCCTATCAGTTGGGAAGCCTGAACAAGTTTTAATTTCACAAAGTAGAATCTTTTCAGCCGGCTTCTACCCCGTCGGTGACAATGCTTATTGTCTTGCCATGTGGTTCACCAAACCATCCTACGACGGGAAACATACGGTTGTTTGGATGGCAAACCGAAACCAACCAGTTAATGGGAATTTCTCAAAGCTTTCCCTGCTAAAAAATGGTGATCTTATCTTAACAGATGCCGGGCGGTTCATAGTTTGGGCCACAAAGACGGTTGGGATTTCTCCGGTGCGATTACATCTCTTCAAATAA 390 0.4538 MDAPVLLLLLALLLSSPLPSSTLDSLSQGSSLSVGKPEQVLISQSRIFSAGFYPVGDNAYCLAMWFTKPSYDGKHTVVWMANRNQPVNGNFSKLSLLKNGDLILTDAGRFIVWATKTVGISPVRLHLFK* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0787 129 PANTHER OS07G0415500 PROTEIN 7 118 - -
Vvi18g0787 129 Pfam D-mannose binding lectin 76 116 IPR001480 -
Vvi18g0787 129 Gene3D - 20 128 IPR036426 -
Vvi18g0787 129 ProSiteProfiles Bulb-type lectin domain profile. 23 129 IPR001480 -
Vvi18g0787 129 SMART blect_4 32 129 IPR001480 -
Vvi18g0787 129 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 127 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0787 Vvi-Chr18 8164022 8164411 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0787 - - vvi:100260797 216.853