Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0781 ATGAAGCGACCTTTTGTTGCCGACGATGATCTGGAAAGCGCAGATCAGAAGATGAAGAATCCAAAGCTTGAAGATGATGAAGAGGACGGGGAGGTTAGGGGAGAGACAACGGGGTTTGTGAATCTGGACGAGAATCTGCTGTACGAGGTGCTCAAGCACGTGGACGCACGTACTCTGGCCATCGCTGGGTGCGTTAGCAAGCTCTGGCACAGAACGTCCCAGGACGAGCGGCTCTGGGAGCTGATCTGTACCAGACACTGGGCTAATATCGGCTGCGGCAACCAACAGGTCCGATCTGTGGTTCTCGCTCTCGGAGGTTTTCGTCGTCTCCACTCTCTCTACCTCTGGCCGCTGTCCAAGCCCCAGGCTTCCTCATCATCTTCGCCGCCGTCGTCATCGTGGCCGTCGACTGCACTATCGCCTCCGTTTGCGCCGCATTCGATGATGCGGCCCAAGTTCCCAACTCGCTGGGGAAAAGACGAGGTCCATCTTTCCCTGTCTCTTCTCTCAATTCGTTACTACGAAAAGATGAATTTCAACAACAGAGGGAGATGA 555 0.5477 MKRPFVADDDLESADQKMKNPKLEDDEEDGEVRGETTGFVNLDENLLYEVLKHVDARTLAIAGCVSKLWHRTSQDERLWELICTRHWANIGCGNQQVRSVVLALGGFRRLHSLYLWPLSKPQASSSSSPPSSSWPSTALSPPFAPHSMMRPKFPTRWGKDEVHLSLSLLSIRYYEKMNFNNRGR* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0781 184 Gene3D - 32 140 - -
Vvi18g0781 184 PANTHER F-BOX PROTEIN SNE 22 180 IPR044184 GO:0009937|GO:0019005
Vvi18g0781 184 MobiDBLite consensus disorder prediction 1 27 - -
Vvi18g0781 184 MobiDBLite consensus disorder prediction 1 32 - -
Vvi18g0781 184 CDD F-box_AtGID2-like 40 83 - -
Vvi18g0781 184 FunFam F-box protein GID2 27 135 - -
Vvi18g0781 184 SUPERFAMILY F-box domain 35 88 IPR036047 GO:0005515
Vvi18g0781 184 SMART fbox_2 42 82 IPR001810 GO:0005515
Vvi18g0781 184 Pfam F-box domain 41 80 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0781 Vvi-Chr18 8077398 8077952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0781 K14495 - vvi:100266007 342.428