Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0753 ATGAGTTGGTGGTGGGCTGGAGCTATTGGCGCTGCCAAGAAGAAATTCGATGAGGATGATGCTCCGCGTGGCTTTCAAAGCGTGGGTTTGGTGATTGGCGTCACCGGCATCGTCGGCAACAGCCTCGCTGAAATTCTCCCGCTCTCCGACACTCCCGGCGGTCCATGGAAGGTTTACGGCGTGGCTCGCCGACCACGTCCCGATTGGAACGCCGATCATCCCGTCGAGTACATCCAATGCGACATCTCCGATTCAGAGGATGCCCTCGCCAAGCTCTCGCCTCTCACCGACGTTACCCACGTCTTCTACGTCACCTGGACCAATCGGGCCACCGAGATTGAGAACTGCGAGGCCAACGGCACCATGCTGCGGAACGTTCTCCGAGCGTTGATCCCCAACGCCCCCAATCTCCGCCACATCTGCCTCCAAACCGGCGGCAAACACTACATCGGACCTTTCGAGGCCTTTGGCAAGATCAAACCCCACGATCCCCCATACCACGAAGATCTACCTAGATTGGACGCCCCTAATTTCTACTACACTCTGGAAGACATCCTGTTCGAAGAGTGTGAGAAGAAGGATGATTTGACTTGGTCCGTGCATCGCCCCGTCATCATTTTCGGGTTTTCCCCATATAGCATGATGAACATACTGGGGACTCTCTGCATCTACGCAGCAATCTGCAAGCACGAGGGAATCCCCTTGAAGTTCCCTGGAAGCAAGGCGGCGTGGGACTGTTACTCAGACGCATCGGATGCAGATCTAATTGCAGAGCAACAGATATGGGCTACGGTTGATCCCTATGCTAGAAACGAAGCCTTTAACATCACAAATGGAGATTTGTTCAAGTGGAAGCATTTGTGGAAGGTGTTGGCTGAGCAATTTGACATGGAATATGCAGAATTTGAGGAGGGTGAAGAGAAGCAAAGCATGGTAGAGATGATGAAAGACAAGGGTCCGGTGTGGGAAGAGATTGTGAGGGAGAAGGAGTTGCTTCCAACCAAACTGGAAGATGTTGCGCAGTGGTGGTTTATAGACCTTGTCCTGGGTGGAGAGTCTTTATTGAACTGCATGAACAAGAGCAAGGAACATGGCTTCTTGGGTTTCAGGAACTCCCGGAATTCCTTTGTTTGGTGGATTGACAAGATGAGAGGTCACAAACTCATTCCTTAA 1173 0.5209 MSWWWAGAIGAAKKKFDEDDAPRGFQSVGLVIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPDWNADHPVEYIQCDISDSEDALAKLSPLTDVTHVFYVTWTNRATEIENCEANGTMLRNVLRALIPNAPNLRHICLQTGGKHYIGPFEAFGKIKPHDPPYHEDLPRLDAPNFYYTLEDILFEECEKKDDLTWSVHRPVIIFGFSPYSMMNILGTLCIYAAICKHEGIPLKFPGSKAAWDCYSDASDADLIAEQQIWATVDPYARNEAFNITNGDLFKWKHLWKVLAEQFDMEYAEFEEGEEKQSMVEMMKDKGPVWEEIVREKELLPTKLEDVAQWWFIDLVLGGESLLNCMNKSKEHGFLGFRNSRNSFVWWIDKMRGHKLIP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0753 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 299 IPR036291 -
Vvi18g0753 390 Gene3D - 27 390 - -
Vvi18g0753 390 CDD 5beta-POR_like_SDR_a 28 350 - -
Vvi18g0753 390 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 26 390 - -
Vvi18g0753 390 FunFam Iridoid synthase 25 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0753 Vvi-Chr18 7890300 7891566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0753 K22419 - vvi:100247199 810.061