Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0749 ATGGGATCGGATTTTGAGCGATGGGAGAAGGATCCCTTTTTCTCTGCGGCGGAGGAAGTACAGGAATCTGCAGACAGGATGGCATCTACATATAGAACATGGATCCACTCTTCCAAGGAACCTTCTAAAATGTGGAACTCTGAGCAACTCCAAAGGGACCTACACACTGCCCTCGGCACTACCAAATGGCAGTTGGAGGAGTTTGAGCGGGCTGTTGGGTCTACTTATGAAGATAGCTCAGCTGACGATGCAAGAGACAGGCATTGTCAGTTCATTGGTGCAATTGGAAACCAGGTTTCAACAATAGAAAGTTCTTTACAAGAATCAGCGGCCTCTGAAGGCAGGTCATCAATCCCTTGGGTGCGATTAGATGAAGGAGAACGTGATGAACTTGCATTATTTCTGACAGGACCAGCACTATCACAAGACAAAACCACTGTAAAAATCATGGGAATGGATAATGAAACTGTGAACCCAAAAGAGGTGGATGAAGAATCGGTGCCTGAATGTCCCAAAAATTCATGTTATTTAACTGAGTGGGGTTCATTGGAGTCCAGGGAGGAGAAGTTGACTGGACACAGGAGGACAGCAAGTGCTAATGCCGACATTGGTGCCTGGAAGATTGCAGTTGCTGATGATGGTGTTCAACAGAGCTTGTTCAATGGGCAACCTTATGTACCACCTCGAAAGGTACCAAGTGTCTCGGGGCTCCTGTGTACCATGGACTGCTCATCCAAGCTGAAATGGCCAAAGAATGGTTTCAGGAAATTGAAGGTTATGGATCGCCATCAAGAAGGTGATTCCGCATTCCTACGGCCTCAGATTAGTCCGGGCATCAGTACATGCTATGAAAAAGGCAAGAGTTGTCTAGATGGCTGTGATGATTGTTATGACAAACAACTCTATGGCTGGTATGGAGCTATGCAAAGACAGCTTCAAAGGTCTCAGTATCAAATGCAATATAGTCGGCCTATTCAAGTGACATTTTGGATCGCTCTCCTTTGCTTGATTGTTTTGATTGCATTGTATGCAATGTAG 1038 0.4557 MGSDFERWEKDPFFSAAEEVQESADRMASTYRTWIHSSKEPSKMWNSEQLQRDLHTALGTTKWQLEEFERAVGSTYEDSSADDARDRHCQFIGAIGNQVSTIESSLQESAASEGRSSIPWVRLDEGERDELALFLTGPALSQDKTTVKIMGMDNETVNPKEVDEESVPECPKNSCYLTEWGSLESREEKLTGHRRTASANADIGAWKIAVADDGVQQSLFNGQPYVPPRKVPSVSGLLCTMDCSSKLKWPKNGFRKLKVMDRHQEGDSAFLRPQISPGISTCYEKGKSCLDGCDDCYDKQLYGWYGAMQRQLQRSQYQMQYSRPIQVTFWIALLCLIVLIALYAM* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0749 345 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Vvi18g0749 345 Gene3D - 9 110 - -
Vvi18g0749 345 CDD SNARE_NTD_STX6-like 11 106 - -
Vvi18g0749 345 PANTHER OS05G0443700 PROTEIN 1 337 - -
Vvi18g0749 345 FunFam Syntaxin 10 8 109 - -
Vvi18g0749 345 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0749 Vvi-Chr18 7867317 7871020 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0749 - - vvi:100262567 691.419