Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0748 ATGGAAGAAGGGGAAATGGTTTGTGAGGCGGCGAGGAAGGGCGACACTGCCAAACTGAGAGCTTTGATAGATTCCGGAGCAGACGTTTCGTTCTTCGATCGCGAAGGCCTTAGCCCACTCATGCACGCGGCCAGGCTCGGCCACGCTGATGCTGTCAAGATTCTGCTCGAAGCTGGTGCTCCCTGGAACGCACTCTCTCCTTCCAATCTCTCCGCCGGCGATTTCGCCATGGATTCTGGCCACCAAGAAGCATTCGAAGTCCTCCTCAACGCCGGGATTCAAGCTGAATTGATCCTAGGAACAATCACAAGGAAAGCAAATAAAAATGGTGATTCTGATGAGGATTACTTGGGAGATAGGATTACTTTTAGTGAGGATAAACTGATGGATTCCAATAGCAAGGCTATCATGATGGCTTGGGAGAAACCATTGATGGAGGCTCATGCAAAAGCTGTTTGCTCAGGTGGTGGTCACATATTGAACATTGGATTTGGAATGGGTCTTGTGGATACAGCTATTCAGCAGTATAAGCCTGCTACACACACCATCATTGAGGCTCATCCTGAAGTTTACAATCGTATGCTTCATACTGGTTGGGGTGAGAAGGACAATGTGAAGATAATATTTGGTCGGTGGCAAGATGTTCTTCCACAACTCGAATCCTATGATGGTATTTTTTTTGACACCTATGGAGAGTACTATGAAGACCTTAGAGAGTTTCACCAGCATCTTCCTACATTGTTGAAGCCTGGAGGGATATATTCATTCTTCAATGGCCTCTGTGGAGGTAATGCATTCTTTCATGTTGTTTATTGTCATCTAGTCTCTCTGGAACTTGAGAATTTGGGCTACTCGACACAGTTAATTCCCTTGCCTGTTAAGGATTGTTTGGGAGAAGAAGTTTGGGAGGGTGTCAAACACAAATATTGGAAACTGGATACCTATTACCTCCCTGTTTGTCAGTCTTTACAGGATTCTGAATGA 984 0.4553 MEEGEMVCEAARKGDTAKLRALIDSGADVSFFDREGLSPLMHAARLGHADAVKILLEAGAPWNALSPSNLSAGDFAMDSGHQEAFEVLLNAGIQAELILGTITRKANKNGDSDEDYLGDRITFSEDKLMDSNSKAIMMAWEKPLMEAHAKAVCSGGGHILNIGFGMGLVDTAIQQYKPATHTIIEAHPEVYNRMLHTGWGEKDNVKIIFGRWQDVLPQLESYDGIFFDTYGEYYEDLREFHQHLPTLLKPGGIYSFFNGLCGGNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEEVWEGVKHKYWKLDTYYLPVCQSLQDSE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0748 327 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 36 322 - -
Vvi18g0748 327 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 109 327 IPR026480 -
Vvi18g0748 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 320 IPR029063 -
Vvi18g0748 327 CDD AdoMet_MTases 159 254 - -
Vvi18g0748 327 PIRSF Rmt2 103 324 IPR017408 GO:0016274
Vvi18g0748 327 PIRSF Rmt2 1 115 IPR017408 GO:0016274
Vvi18g0748 327 SMART ANK_2a 2 31 IPR002110 GO:0005515
Vvi18g0748 327 SMART ANK_2a 35 64 IPR002110 GO:0005515
Vvi18g0748 327 SMART ANK_2a 68 97 IPR002110 GO:0005515
Vvi18g0748 327 Gene3D Vaccinia Virus protein VP39 105 322 IPR029063 -
Vvi18g0748 327 SUPERFAMILY Ankyrin repeat 9 95 IPR036770 -
Vvi18g0748 327 Pfam Ankyrin repeats (3 copies) 9 94 IPR002110 GO:0005515
Vvi18g0748 327 Gene3D - 1 104 IPR036770 -
Vvi18g0748 327 ProSiteProfiles Ankyrin repeat region circular profile. 35 60 - -
Vvi18g0748 327 FunFam Arginine N-methyltransferase 2 103 322 - -
Vvi18g0748 327 ProSiteProfiles Ankyrin repeat profile. 35 67 IPR002110 GO:0005515
Vvi18g0748 327 FunFam Protein arginine N-methyltransferase 2 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0748 Vvi-Chr18 7855955 7862611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0748 K18477 - vvi:100259168 678.322