Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0745 ATGGAGCTTGCTCAGGAGCTCTTGTTCACAGTTTCTCTTGCTCTCCTCTTCTCTTTTCTTGTGGCCAAACTCGTCTCCCTGGCCATGGCTGCTGACTTGAAGAGCGCCCAGAATGTGGATGATCACATCGTTGCCAATGAGGTTAGGTTTGTAGAAACCGAGACTAGGGTGGAATCTGTTGATGGAGGATCGGGTCTGGTTGAGGAAACTTGTGAAATTACGCGTGGCGGTGAAGTGCCGGTTTTGCCTTCGGAGGAGGAAGTGTCGGAGATTGTTGAATTGCCGGAAAATTCACCGAGGGAAAGGTCGGGGCATGAGATTTTAGTGAGTCATGATGTTGCTGTCGTTGAGGAACGTGACGAGAGGGAGTTGGAGAGTGAGGAAGATGATTGGGAGGGGGTTGAGAGGAGTGAATTGGAGAGGGTTTTTGCGGCGGCTGCCAACTTTGTTGGTTCTGGGAACAAGGGTGACGGGTGGTCAAGTGATGCGCAGATGGAATTGTATGGACTTCATAAGATCGCAGTTGAGGGGCCTTGCCATGAGCCTCAGCCTATGCCGCTCAAGCTCTCTGCCCGTGCCAAGTGGAATGCTTGGCAAAGGATGGGAAACATGAGTAGGGAGGTGGCCATGGAGCAGTATATTGCTCTTCTTTCAGATAGAGTTCCTGGGTGGATGGAAGCTAGTTCTGCTGGAGATGACAAACCAGAGTCCTCAGAAGGCGGAGTACATGATATACTGGATCCTAATCAAAGCTCATTGCTGCATGATCAAATAAGTTCTACAAATGAAACGAAACCAGAACTGAAGTCTGGTACTTTGGGAATTGATTTGACTGAGGGTTCAAACTCTGTGAGCACGGAGAAAGAATGA 870 0.4943 MELAQELLFTVSLALLFSFLVAKLVSLAMAADLKSAQNVDDHIVANEVRFVETETRVESVDGGSGLVEETCEITRGGEVPVLPSEEEVSEIVELPENSPRERSGHEILVSHDVAVVEERDERELESEEDDWEGVERSELERVFAAAANFVGSGNKGDGWSSDAQMELYGLHKIAVEGPCHEPQPMPLKLSARAKWNAWQRMGNMSREVAMEQYIALLSDRVPGWMEASSAGDDKPESSEGGVHDILDPNQSSLLHDQISSTNETKPELKSGTLGIDLTEGSNSVSTEKE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0745 289 MobiDBLite consensus disorder prediction 226 289 - -
Vvi18g0745 289 Pfam Acyl CoA binding protein 140 217 IPR000582 GO:0000062
Vvi18g0745 289 PRINTS Acyl-coA-binding protein signature 159 177 IPR000582 GO:0000062
Vvi18g0745 289 PRINTS Acyl-coA-binding protein signature 203 220 IPR000582 GO:0000062
Vvi18g0745 289 PRINTS Acyl-coA-binding protein signature 182 197 IPR000582 GO:0000062
Vvi18g0745 289 SUPERFAMILY Acyl-CoA binding protein 138 225 IPR035984 GO:0000062
Vvi18g0745 289 Gene3D - 133 240 IPR014352 -
Vvi18g0745 289 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 139 226 IPR000582 GO:0000062
Vvi18g0745 289 MobiDBLite consensus disorder prediction 250 268 - -
Vvi18g0745 289 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0745 Vvi-Chr18 7839602 7842815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0745 41 253 Acyl Lipid Metabolism Gene Families AT4G24230 44.131 4.38e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0745 - - vvi:100248941 504.212