Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0741 ATGGGAAGCGGTTATGTGAGAATCATCGGCAAGTGGCAACAGCCATGGAAGATAAAAACTTCAACTCCATCTTCATTTGCATCGGTTCACCAACTCAGAAATATTAGGAATTCAGAAATCTCTCGCCCAATTAATCTACTTTCTTCCCGTTCATTTTCATCATCATCATCGCGGTCCTCCAAGATTGGATTTCTGGGCTGGTATTTGGGCATGCTCGAAACCAGTCCTCTCATCACCAAAAGCGTTACATCCTCCCTTATCTTCGCAGCTGCCGACTTGACGTCCCAGAAAATTATGCTGCCACCTTCGGGCTCTTTTGACCCTATTAGGACATTACGTATGACTGGCTATGGATTGCTCATTTTAGGGCCTTCACAGCATTTGTGGTTTAACTTTGTGGCAAAAGTCCTACCAAAGCGAGATGTGATCACTACCCTGAAGAAAATAATCATGGGACAGGCTATCTTTGGACCTTGTATCAATTCTGTTTTCTTCTCTGTTAATGCAGCTCTGCAAGGTGAAAGTGGGGATGAGATTGTTGCCAGATTGAAGCGAGACCTGCTCCCAACTCAGCTAAATGGTCTTCTGTACTGGCCAATCTGTGATTTTGTTACATTCAGATTTGTTCCTGTCCACCTACAGCCATTGATGAACAGTTCGTGTTCATACCTGTGGACTATATATTTGACATACATGGCAAGCTTAAGGAAAGTGTGCACTGATTAG 726 0.4366 MGSGYVRIIGKWQQPWKIKTSTPSSFASVHQLRNIRNSEISRPINLLSSRSFSSSSSRSSKIGFLGWYLGMLETSPLITKSVTSSLIFAAADLTSQKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVAKVLPKRDVITTLKKIIMGQAIFGPCINSVFFSVNAALQGESGDEIVARLKRDLLPTQLNGLLYWPICDFVTFRFVPVHLQPLMNSSCSYLWTIYLTYMASLRKVCTD* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0741 241 Pfam Mpv17 / PMP22 family 170 229 IPR007248 GO:0016020
Vvi18g0741 241 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 64 232 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0741 Vvi-Chr18 7790780 7794390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0741 61 237 Miscellaneous Gene Families AT2G14860 62.147 2.11e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0741 K13348 - vvi:100247188 470.7